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GT13772

CSHL Arabidopsis genetrap mutant lines

Original: GT13772

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13772

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 252931 [Map]; Strand: c
      • AT5G01670.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 0; Region: exon5 (CDS)
      • AT5G01670.2 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT13772 - 5-prime edge
    CTTTCTCCCT TATTATGATA TGAAGAACCT ATACCTGGCA AACGGCAGGG 
    ATCAGTTCAG CAAATCCTAG CAGCTTATTG AGCTTAGTAA CTGTAAAGTT
    ACAGACACCG ATATTCCTGA CGAGACTGTC CTTGGAAAGA TTCTCCATTT
    CTCTCCAAAC TCCTTCCATG TCAAAGTCAA GAACGTCCCC TGCCTTTGGT
    GGCTTACTGG CTCCTTCTCT TAGCCGGAAA GGCCAGTGAA TCTGCACAAA
    ATTGAATTGT GAAGAGAGGA AGAAGAGTAA CAAGAAAGAC TAAAACTTGA
    TTCACAACTT ACCAAGTAGA GATCAAGGTA CTCTAATTGA AGCTCTTTAA
    GGGTGTTTTG CAGAGCAGGA CGCACTCTCT CAGGAGATAA CTCAGTGCAC
    CTTTTGTTTA AACATGTACC AACCAAAA

AT5G01670.1

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 19068 Blast hits to 19040 proteins in 2308 species: Archae - 339; Bacteria - 12194; Metazoa - 2060; Fungi - 1600; Plants - 1171; Viruses - 0; Other Eukaryotes - 1704 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01670.2

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 16960 Blast hits to 16922 proteins in 2239 species: Archae - 315; Bacteria - 10569; Metazoa - 1835; Fungi - 1554; Plants - 1108; Viruses - 0; Other Eukaryotes - 1579 (source: NCBI BLink).
Link
InterPro Scan - TAIR