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GT13774

CSHL Arabidopsis genetrap mutant lines

Original: GT13774

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13774

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26258244 [Map]; Strand: c
      • AT1G69780.1 - [+] show detail - Homeobox-leucine zipper protein family
        Distance: -695; Region: promoter
    Flanking Genome Sequence: GT13774 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATCTGCAT 
    GTCTCTCCCA AGGGGAAAAA GGAGAGTCCT TTCTCTTCTT ACCATTTTGA 
    TTATCATCTC TTCATTTTCC ACTTTGTACG CAAGCTAAAC CCCCTTGTAA 
    TTTGCTTCCT TTTTTCATTT TCAACAATAT TTAGGATTAT GCCAATTTGA 
    TATGAGTAAT AACACAACGA AAACAATAAG AATACATGTT TTGGTCAATT 
    CTACGATTTT AATCTGAAAT TACATTTCTT TTTAACCCCA TTTTTTTTGT 
    TT

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT13774 - 5-prime edge 
    CTTTCTCCCT GCATGCAGAG AGGTGTTCAT CTCACTCGAC C

AT1G69780.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper protein family
Curator Summary
Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.
Computational Description
ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR