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Mutant Lines
GT13797

GT13797

CSHL Arabidopsis genetrap mutant lines

Original: GT13797

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13797

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 54861 [Map]; Strand: c
  - AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
    Distance: -1412; Region: intergenic
  - AT4G00150.1 - [+] show detail - GRAS family transcription factor
    Distance: 2338; Region: intergenic
Flanking Genome Sequence: GT13797 - 3-prime edge
```
GATGGAGATT GAAAGAGAGT AAAAATTGTA TCACAAGCTT CTCTCATTAA 
ATTATTTATT TAACTAATAA ATAAACACAA GTAAGAAAAG AATTTTAAAA 
TTAAAAATAA TATAAATACA TTTTTAACTT TTGTTATGCA CACAAAAACA 
CACCCATCAA TTT
```
5 prime edge [+] show sequence
1. Chromosome: 4; Position: 54683 [Map]; Strand: c
  - AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
    Distance: -1234; Region: intergenic
  - AT4G00150.1 - [+] show detail - GRAS family transcription factor
    Distance: 2516; Region: intergenic
Flanking Genome Sequence: GT13797 - 5-prime edge
```
TTTACAAGAA CTTCATTTAT TTTCTTAGTT AGTCTAATTT ATTTCAATAA 
ACAAACTCTA CTC
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 54731 [Map]; Strand: c
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -1282; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 2468; Region: intergenic

TTCATCCTAC TTTCTCCCTA CTGGCATATC TGCTCCTCAA CCTCTCACTT 
TACAAGTACT TCATTTATTT TCTTAGTTAG TCTATTTATT TCAATAAACA 
AACTCTACTC AAGTTCATCA AGATTCGTAA CAGTGGAATC CTTTATTAAT 
GTTAGATCAT CAAACTCTAC ACATGTTTAT TTCCATCTCT ATGCATGCCT 
TTATATTGCT TAAGTTGTAT ACACGTACAT ATACACTTCA CTACTCTTAT 
TATCTAGTTC CATATTACGC TATATATTTA TGAATTTATA TACATAGACC 
ATACTCATGT CCTTGAAAAT CAGTTACATG TTTCTTT

AT4G00140.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR