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Mutant Lines
GT13808

GT13808

CSHL Arabidopsis genetrap mutant lines

Original: GT13808

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13808

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 9436396 [Map]; Strand: c
- AT1G27170.2 - [+] show detail - transmembrane receptors;ATP binding
  Distance: 0; Region: exon2 (CDS)
- AT1G27170.1 - [+] show detail - transmembrane receptors;ATP binding
  Distance: 0; Region: exon2 (CDS)

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACTGAA 
CAATATGAAG GTATGAATAT GAAGTTATAT ATTATTTGTA TATAAGACAT 
ACATACTGAT GATCTGTTTT CTTTTTCCTG TAATGGAATG ACAGGGAACA 
TCATCCATTC GAGGAATCGT ACTTGACTTT AAAAAAAAGT TTGCTAGGGA 
CCCTACTGCA GATGAAATTG TCTCGAGGAG TCTACGCAAC AATCCGGGTA 
TCTACTCTGT ATTCAATTAC CTGAAGAATA AGTTAGTAAG ATTTCCAGCA 
GAGGAAAAGC CAAAAAGTTC TGAAATCACC ATTCCCGTAG AATCTTTTGC 
ACCAATGACG AAGTTGAGAC TTCTTCAGAT TAATAACGTG GAACTGGAAG 
GAAATCTTAA ACTTCTCCCA TCTGAACTCA AGTGGATACA GTGGAAAGGT 
TGCCCCTTAG AAAATCTCCC TCCGGATTTT CTTGCTAGGC AACTTTCTGT 
TCTTGATCTT TCAGAGAGTG GAATAAGACA AGTCCAGACT TTGCGCAACA 
AAATGGTAAG CTTTCTTCTT TCCTGTAGCA TGGGGAAGCA TATAGTTTTA 
AGTCAAATTC TCACTGTAAA AACATTTCTC TGTTTCTTTC AGGTGGATGA 
GAATTTGAAG GTTGTAATTT TGC

5 prime edge [+] show sequence

Chromosome: 1; Position: 9436340 [Map]; Strand: c
- AT1G27170.2 - [+] show detail - transmembrane receptors;ATP binding
  Distance: 0; Region: exon2 (CDS)
- AT1G27170.1 - [+] show detail - transmembrane receptors;ATP binding
  Distance: 0; Region: exon2 (CDS)

CCTACTTTCT CTCTCTCGAC CAGTACGGTC ATAATTTCAC CACGATCCCA 
GAGTCTACTT CGCAATCCCG GATCCTCACG GCTTTCTTTA AGGACCATCT 
GCCTACCCAT GTCTCTAATC TGATCATGCA TCCAAAGAGT ATCGTTTGCC 
AAGATCTTAA CAAGAGATTT CTGTCTAAGG ACACTGAGAG CAGCCTCAGC 
GTTTAACCCA CATCCTTTCA GTACAATGAC AACTTCGTCT TTTTTTATCT 
CCATTTTAAG AAAGAGACAT GCAATGTCGA GGAATACTTT CTTTTCTTCA 
TCGTCTAAAG ATTTGAAACT CAGTTCCAGA ACATCCTGAA GATTGCCTGG 
TTGAGTCTTT TTCAGCTTAT CCAGTTGAGT TTGCCAATCC TTTTCCTCCT 
TCTTGTCATA CAAAAAAGAT CCAAAAACTT CAACTGCAAG CGGCAATAGT 
CCTGAGATCT GGACAATCTT CTTGGATAAC GCCAACAGAT TCTTTGTTGG 
TTCTTCTTTT CGTAGTGAAT GATAACTAAA GAGCTTCAAT GCCTGCGGCT 
CAGTCAAGCA CTTGACCTCA TACTGTTGGT TCACTGAGAG CTTACTCAGA 
ATCTCAGAAT CTCTAGTAGT GATTACTATA AGGGTTCCTT GACCATACCA 
TCTTGTTTCA CCAACCAGGG AATGAACCTG GTCTATGTG

AT1G27170.1

Model type: Protein coding
Short Description: transmembrane receptors;ATP binding
Computational Description: transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G27170.2

Model type: Protein coding
Short Description: transmembrane receptors;ATP binding
Computational Description: transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink).
Link: InterPro Scan - TAIR