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GT13816

CSHL Arabidopsis genetrap mutant lines

Original: GT13816

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13816

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19516092 [Map]; Strand: w
      • AT2G47570.1 - [+] show detail - Ribosomal protein L18e/L15 superfamily protein
        Distance: 0; Region: intron3 (CDS)
      • AT2G47570.2 - [+] show detail - Ribosomal protein L18e/L15 superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT13816 - 5-prime edge 
    CCTACTTTCT CCCTGCTTAG GACCTCTAAG CAGAACCTGC AATCGTTACG 
    GAATGCTACA TCAATCGCTA CTGCAATAAT AAAAAGTGAA AATATAACCC 
    TTGTAAACTG AGTACAAGTG GTCCTCGAGA TAGATATTCT CTAATTTTCA 
    TCGAGATAGC CTTTTAAACA AAGGCTTACA AGCCACTAGA TTTTGAAAGT 
    TAGGACAGTA ACCTCAAATT CCAATCATCA TGAAACGAGA CATAGTAACT 
    GAACTAAGCT ACATACGTCA CGAACAAGTA AACGATTAGC ACAAGTTTCC 
    ACATTTCGAC AACTGAACTA AGAGTGAAAC AAGAATGGGA TATACCGTGT 
    TCTGACCAAG TGGGGCACGG AAGAGCGAGC TGATCAAAAG TGAGGCACTC 
    TCCACCAGCC TGGTGGATCC TAGCTCTAGC TCTCTCAGTG AACCTCAATG 
    CAGTAACTGT AAGAGCCGGA ACATCTTCGA TTCTGACATC ATCAGTCACA 
    GTACCAACAA TAACAGCAAT CATTCCATCC TAATAAAATC GAACACACAC 
    ACACAGAATT AGTTCATGAG TCGCCACCAA GTAACATAAC ATTGAACTCA 
    ATGCAGTAAC AACCTAAACA ACAACAAAAT TCAAACCTTT CCGTCCATGT 
    ATCGGACCAG ACGAGAGAGA GACAGTGGCG CTTTGTTCAC TTTGCTCATG 
    AACAAACGCT TCAAAATCAC GGCATTGAAC TTGCTTTCTG TTCTCCTCAC 
    CAGAAATCGG TTCGCCTAAA AAAGAAAAAA AA

AT2G47570.1

Model type
Protein coding
Short Description
Ribosomal protein L18e/L15 superfamily protein
Computational Description
Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e/L15 (InterPro:IPR021131), Ribosomal protein L18e (InterPro:IPR000039); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1); Has 755 Blast hits to 755 proteins in 295 species: Archae - 15; Bacteria - 0; Metazoa - 328; Fungi - 154; Plants - 126; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47570.2

Model type
Protein coding
Short Description
Ribosomal protein L18e/L15 superfamily protein
Computational Description
Ribosomal protein L18e/L15 superfamily protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18e (InterPro:IPR000039), Ribosomal protein L18e/L15 (InterPro:IPR021131); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18e/L15 superfamily protein (TAIR:AT5G27850.1).
Link
InterPro Scan - TAIR