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Mutant Lines
GT13839

GT13839

CSHL Arabidopsis genetrap mutant lines

Original: GT13839

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13839

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 8768482 [Map]; Strand: c
  - AT1G24793.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon3 (CDS)
  - AT1G24793.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon3 (CDS)
2. Chromosome: 1; Position: 8805390 [Map]; Strand: c
  - AT1G25054.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon6 (CDS)
  - AT1G25054.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon5 (CDS)
3. Chromosome: 1; Position: 8819768 [Map]; Strand: c
  - AT1G25145.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon3 (CDS)
4. Chromosome: 1; Position: 8834146 [Map]; Strand: c
  - AT1G25210.1 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon4 (CDS)
  - AT1G25210.2 - [+] show detail - UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
    Distance: 0; Region: exon4 (CDS)
Flanking Genome Sequence: GT13839 - 5-prime edge
```
CAACAGACCA AGTCAATAAC AATTTATGTA CAAGCAGAAA ATACGTCAAA 
ATGCCATTAG ACTGAACCTG TGGGAAGTCG ATACCACAAG TGATCCGAGT 
CTCTAGAGCC GGAAATGCAG CAACAAAAGT ATCGTTCTTG CAAACATACA 
CAGGCTTGTT CACATGTGCG ACCATCTTCT CTACACTTTC ACCATCATGG 
TTTTGAGCCG CGTTTATGCC AACTCCTTGT ATCGCATCGA CCCATTCTTT 
AGCTGATCCA TCAAAAATAG GGACCTGTCA CTTGGTTAGT GTTGCCTACA 
CTCATCATCT CCTCCAGTGT ACCAAGTCTA TAAAACTAGG AGCTACACTG 
CACAGGCAGA TGTTGACAAT CTCTATAGCA TACAAATCCA GTCAAAATAG 
ACAATACGAG ACATTGATTC GACCTATGAT TAC
```

AT1G24793.1

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G24793.2

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G25210.2); Has 5025 Blast hits to 5025 proteins in 1409 species: Archae - 0; Bacteria - 2975; Metazoa - 1; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 1994 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25054.1

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 5320 Blast hits to 5320 proteins in 1417 species: Archae - 0; Bacteria - 2992; Metazoa - 1; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25054.2

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 5321 Blast hits to 5321 proteins in 1417 species: Archae - 0; Bacteria - 2995; Metazoa - 1; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2270 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25145.1

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1).
Link: InterPro Scan - TAIR

AT1G25210.1

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G25210.2

Model type: Protein coding
Short Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein
Computational Description: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; FUNCTIONS IN: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; INVOLVED IN: lipid A biosynthetic process; CONTAINS InterPro DOMAIN/s: UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal (InterPro:IPR015870), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), UDP-3-O-acyl N-acetylglucosamine deacetylase (InterPro:IPR004463), UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal (InterPro:IPR011334); BEST Arabidopsis thaliana protein match is: UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (TAIR:AT1G24793.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR