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GT13852

CSHL Arabidopsis genetrap mutant lines

Original: GT13852

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT13852

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 586917 [Map]; Strand: c
      • AT2G02220.1 - [+] show detail - phytosulfokin receptor 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13852 - 5-prime edge 
    CTTTCTCCCT GACCGATGGT TGGATCAATT CTTCTTCTTC TACAGATTGC 
    TGCAACTGGA CCGGAATCAC CTGCAATTCA AACAACACCG GAAGAGTTAT 
    TAGATTGGAG CTTGGGAACA AAAAGCTGTC GGGGAAGTTG TCTGAATCTC 
    TTGGGAAGCT AGATGAGATT AGGGTTCTTA ATCTCTCTCG AAACTTCATC 
    AAAGATTCGA TCCCTCTTTC GATTTTCAAC TTGAAGAATC TACAAACTCT 
    TGATTTGAGC TCTAATGATC TCTCCGGCGG AATCCCAACA AGTATAAATC 
    TCCCAGCTCT GCAAAGTTTT GATCTTTCTT CAAATAAATT CAATGGGTCG 
    CTTCCGTCTC ATATCTGCCA TAACTCTACT CAAATTAGGG TTGTGAAACT 
    TGCGGTGAAC TACTTGGCCG GAAACTTCAC TTCCGGGTTT GGGAAATGTG 
    TCTTGCTTGA GCATCTCTGT CTTGGTATGA ACGATCTTAC TGGTAACATC 
    CCTGAGGATT TGTT

AT2G02220.1

Model type
Protein coding
Short Description
phytosulfokin receptor 1
Curator Summary
Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).
Computational Description
phytosulfokin receptor 1 (PSKR1); FUNCTIONS IN: peptide receptor activity, protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phytosylfokine-alpha receptor 2 (TAIR:AT5G53890.1); Has 188205 Blast hits to 128830 proteins in 4018 species: Archae - 120; Bacteria - 18455; Metazoa - 56562; Fungi - 9680; Plants - 79633; Viruses - 405; Other Eukaryotes - 23350 (source: NCBI BLink).
Link
InterPro Scan - TAIR