1. Home
  2. Mutant Lines
  3. GT13867

GT13867

CSHL Arabidopsis genetrap mutant lines

Original: GT13867

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13867

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16195679 [Map]; Strand: w
      • AT3G44620.1 - [+] show detail - protein tyrosine phosphatases;protein tyrosine phosphatases
        Distance: 0; Region: exon5 (3UTR)
      • AT3G44620.2 - [+] show detail - protein tyrosine phosphatases;protein tyrosine phosphatases
        Distance: 0; Region: exon4 (3UTR)
      • AT3G44630.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: -276; Region: promoter
      • AT3G44630.3 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: -305; Region: promoter
      • AT3G44630.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: -367; Region: promoter
    Flanking Genome Sequence: GT13867 - 3-prime edge 
    GACCGTTACC GACCGTTTTC ATCCCTAGGC TGAAGTAGAG AGCTTCTTGC 
    AGATCATATG AAGAATGTTA CTGCCATTAA AAGAACAACA CAACAAGTGT 
    CTCGATTTTT GGAATTGATT AAGTAAGAGT TATTTTAACA TGAAAACGTA 
    ATGTAAAGAA GAAACGTAAA GTAAAGGAAT GCTATGGTTT TTGATGTGCA 
    AAGCTATCAA TCTCAAATCT CAATAATAGT AACAATAAAA GTGGGACTCT 
    GAAGTTGTTG TATCATCAAC TTTCCACACG GATACTGTCC AGCAAAGACT 
    CACAAGCATC TTCAAGCAAG TCCAGTACCT GTGAAAGAAC CAAGTAGACA 
    AGTAACAGAT CAAGATTCAA CTTTCCAAGT GAGTTATGTC CTAAGAAAAC 
    AGATCTAACA GGAAATATGG ATCTTTCCAA GTGCATTTCC TCTTGCAAAA 
    TTCTGGAACG GGAGGCCATT TGGGAGTGAC AACAATGGTA TGCTAATGCC 
    AATACTAAGC ATAGCTGTAA TTTTATAGGT AGCATCTGTA TAAACCAAAA 
    ATTAATATCC ACATTCAGCT TCATCTCACT CGACAAGAAT TACCTTCTCA 
    AAACCTTGAG CTCCACCATA ATATGGATCA GGAACAAACT TGTCATTGTG 
    TTTCTTGCAA TAAGAACACA TTAGCTTAAC CTGAAAATTC AACGAAAATC 
    TATCAACTAA ATAGAGTTCC AAAGTCCCAG CAAACACACA CCAACGATAC 
    CTTTTTATCT GCATCGGGCG GGAAATTCCC TCTGGCTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18710135 [Map]; Strand: c
      • AT2G45403.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT13867 - 5-prime edge 
    CCTACTTTCT CCCTGACCTA ACGTCTCCAT GACGTTTTGT GCGTGAATCT 
    TCTTCACGTC GTCTTCGGTT TACTCTTCAA CCGACTTATG CTCCATTTTT 
    CTCCGAGGTA AGCATCCTCT TGTGCTCCAT TTTTCTCCGA GGTAACCATC 
    CTCTTATGGT GTCCTCTTTT GATCACCACC ACGTCTTTTC GACGTTTTGT 
    GCGTGAAAAT CTCTTCACGT CTTCGTCGGC TATCTTTGCA ACCGAACTGA 
    ACTCTGCTCC CTCTCTCTTA GGTAAGCAGC TTCACACCCG TAAGCAAGCT 
    AATATCCCTG TGTTGCTTTC TCCAACAATC ACCTCAATGT GATCGTCACA 
    CGTACAAAAG TCACACCATT TCTTGGCCTT CTTTTGACTT TTGTCGCCCC 
    TTTTGAAGCA AACTTTTCTC CACGTTTTCG TGTTGTAGTC ATCTTCACAA 
    CTCAACACAA

AT2G45403.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34095.1); Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44620.1

Model type
Protein coding
Short Description
protein tyrosine phosphatases;protein tyrosine phosphatases
Computational Description
protein tyrosine phosphatases;protein tyrosine phosphatases; FUNCTIONS IN: protein tyrosine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase/arsenate reductase (InterPro:IPR000106), Protein-tyrosine phosphatase, low molecular weight (InterPro:IPR017867); Has 5215 Blast hits to 5214 proteins in 1894 species: Archae - 4; Bacteria - 4223; Metazoa - 305; Fungi - 139; Plants - 47; Viruses - 0; Other Eukaryotes - 497 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44620.2

Model type
Protein coding
Short Description
protein tyrosine phosphatases;protein tyrosine phosphatases
Computational Description
protein tyrosine phosphatases;protein tyrosine phosphatases; FUNCTIONS IN: protein tyrosine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase/arsenate reductase (InterPro:IPR000106), Protein-tyrosine phosphatase, low molecular weight (InterPro:IPR017867).
Link
InterPro Scan - TAIR

AT3G44630.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 41227 Blast hits to 23573 proteins in 843 species: Archae - 26; Bacteria - 2454; Metazoa - 3797; Fungi - 287; Plants - 32967; Viruses - 4; Other Eukaryotes - 1692 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44630.2

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 41227 Blast hits to 23573 proteins in 843 species: Archae - 26; Bacteria - 2454; Metazoa - 3797; Fungi - 287; Plants - 32967; Viruses - 4; Other Eukaryotes - 1692 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44630.3

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 41236 Blast hits to 23630 proteins in 841 species: Archae - 26; Bacteria - 2523; Metazoa - 3794; Fungi - 289; Plants - 32905; Viruses - 4; Other Eukaryotes - 1695 (source: NCBI BLink).
Link
InterPro Scan - TAIR