1. Home
  2. Mutant Lines
  3. GT13871

GT13871

CSHL Arabidopsis genetrap mutant lines

Original: GT13871

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13871

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3067744 [Map]; Strand: w
      • AT3G09975.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13871 - 3-prime edge 
    TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    CTTGCGACCT CATAGTATTG TAAACTGCGT GAGTAGGCTC TAGAGACATC 
    TTGTTGAAAA ACGAGTTGTT AGAGTAACGA ACGAAACAGA GCGTCTTGTC 
    GGCGTTGTCA CCTGTCCAGT ATAATGAGTC GGTCTGGTTC GGACAGGTTT 
    GTAATAAACC TTGAGACGCG AGTTGGATAC AATCGGAACA CACCCTTGGA 
    TCAGACCCTG GGATACAGAG ACCTAAGGCA TAGATTCTTC TTACTCCACC 
    ACCTAAATAT CTACAACGGA ATAAGTGTAA CTGATGATGT GTTTATCTAA 
    CAACTTAAAC CAGATTTTTT GTAAGTTAAA TGATCGCAAA ATGGTTAGTT 
    TTTAATGTTC AAATAAGAAA CAAAACTTAA ATCGAATAGT GTGTTGAAAG 
    CGTTTGCCAC CAATCGAATA CGTCTTCCAT GCTTCACCGT TTAAACTTTA 
    CTTTCTATTA AGAAATTTTG CACAAAATTT TATTGATTCT CTTAATAATA 
    TAACTCTTAA TTGTGATGAT TATGAACGTG ATTGAGGAAG AGGATATCGA 
    CTTTATACCT AATTGCCAGC ATCAGCACTT ACTTAGGATT TAGTCGTCTC 
    ATGAAAAATG ATTTGCTGTC TCTCATCAAA CCTCATATTT TCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3067806 [Map]; Strand: w
      • AT3G09975.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 25; Region: intergenic
      • AT3G09980.1 - [+] show detail - Family of unknown function (DUF662)
        Distance: -1425; Region: intergenic
    Flanking Genome Sequence: GT13871 - 5-prime edge 
    TCCTGCTTCG AACAGTTTAT TCCTTAAGGA AGTTAACGGA CCTTAGCTCA 
    GTTTGATCAC AAATAAAAAA AATTCAGGTC GAGCTCAATC AACCAAACCG 
    TATAATACTA ACTCACACTT GAAATCTGTT TTTGATTATT AGACTACATA 
    CAAGACATTA GAGACTTGTA AAACAATATA TTGGTTTTAT GTCGATTAGT 
    AGGTAATCTA TCTTTCTAAC CCTAGCTAAT TAAAACAACA AAACCTTAGC 
    TTGCCAAAGC TCATCCATTA ATTGAAAAAA GATCTACTAA GTAAGTATAG 
    TTTTGTATAT ACTAATTTGT GGGACAAACA AAATTTCAAA ATGGCTAATG 
    AGGACAAGAT TTATACCCCA CCATTAAAAC AATGTGACTA GTTATATATC 
    GAGTTGATAT GATGGCTAGC TTAGAGGAAT AATTTATAGT ATACTACATT 
    GAAATAAAAG TAAATTCCAT TAAGAGAGAA AAGGAAAAAA AAAAAGGAAA 
    AAAAAAAAAA AAATTTTTTT GTTCCAAAGG CCCTAATTTA AACCCTTGGG 
    TGAAGGGGCC ACCGGCCTTT ACCCTCCGTT TTACCTTTCC CCCCCCCTCT 
    TTTTTCAATG AAAAATTTTT TTTTTCCAAA AAAAAAAAAA AATTCCTTTA 
    CAAAACCCTT TCTTTGAGTC CCTTAAATTT TCCAAAAAAA AATAAGTTTG 
    GCCCCTTTTT TTGGAAAACC CGCCAAAAAC CCTAAAAAAT TTCCCTCTCT 
    TATTATTTTT TT

AT3G09975.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09980.1

Model type
Protein coding
Short Description
Family of unknown function (DUF662)
Computational Description
Family of unknown function (DUF662) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF662 (InterPro:IPR007033); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF662) (TAIR:AT2G36410.2); Has 2513 Blast hits to 2174 proteins in 327 species: Archae - 81; Bacteria - 288; Metazoa - 1019; Fungi - 163; Plants - 196; Viruses - 10; Other Eukaryotes - 756 (source: NCBI BLink).
Link
InterPro Scan - TAIR