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GT13878

CSHL Arabidopsis genetrap mutant lines

Original: GT13878

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13878

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1070737 [Map]; Strand: c
      • AT3G04080.1 - [+] show detail - apyrase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13878 - 5-prime edge
    CTTTCTCCCT AATGCCGGGG ACGTCGACGT CCGTCTCTGT CATCGAGTAC 
    ACGATGAAAA ACCACGAGGG AGGTTCCAAT TCGAGGGGTC CGAAGAATTA
    CGCTGTGATT TTTGATGCTG GAAGTTCTGG AAGCCGTGTG CATGTTTACT
    GTTTCGATCA GAATTTGGAT CTTGTTCCTT TGGAGAATGA GCTCGAGCTC
    TTCTTACAGG TATTCATTGC ATTTCTTTTG CTCTTCTGAA GTGTTGTTTT
    TTCTGATAAT GGAACCTTGC CTCAGGCTCA TGAACGAACT CTCGTTAGCA
    AATGCTAGAT CAATGTTAAG CTAATATTTG ATTCGGTTAT TCGGTATTCA
    AGTTTGTTAC CAATGATGCA ATTGTCTTAG TTAAGTTTCT ATTTTTAGTT
    TATAACCGCA TGGGGCTCTG TTTCTATAGT TTCTTCAAAT TGAAGTTGTG
    TGGATTTTTC TCACAATTGG GTTAAAAAAC TTCACTTATG TACTTCCAAC
    GATAAACTTA AAAGGGACGA TATTAGATTC CCGTGTTCAT TGTGCTTTGC
    TGCAATGTTT ATTTTGCATT TGGTGGTATT TCTAGCTCGC AGAAATCTTT
    TTGTCTGAAC TTTTATTGTG ATATTATTTC AGCTAAAACC GGGTTTAAGT
    GCATATCCTA ATGATCCTCG GCAATCAGCA AACTCTTTAG TAACTCTTCT
    GGACAAAGCA GAAGCTTCCG TTCCCCGTGA GTTGCGTCCA AAGACTCCTG
    TCAGAGTTGG GGTATGAAAC GAGTTCTTTC ACACAAAGTC AAG

AT3G04080.1

Model type
Protein coding
Short Description
apyrase 1
Curator Summary
Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY2 causes a complete inhibition of pollen germination.
Computational Description
apyrase 1 (APY1); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 2 (TAIR:AT5G18280.1); Has 1435 Blast hits to 1431 proteins in 229 species: Archae - 0; Bacteria - 35; Metazoa - 605; Fungi - 313; Plants - 348; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
Link
InterPro Scan - TAIR