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GT13878

CSHL Arabidopsis genetrap mutant lines

Original: GT13878

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13878

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1070737 [Map]; Strand: c
      • AT3G04080.1 - [+] show detail - apyrase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13878 - 5-prime edge 
    CTTTCTCCCT AATGCCGGGG ACGTCGACGT CCGTCTCTGT CATCGAGTAC 
    ACGATGAAAA ACCACGAGGG AGGTTCCAAT TCGAGGGGTC CGAAGAATTA 
    CGCTGTGATT TTTGATGCTG GAAGTTCTGG AAGCCGTGTG CATGTTTACT 
    GTTTCGATCA GAATTTGGAT CTTGTTCCTT TGGAGAATGA GCTCGAGCTC 
    TTCTTACAGG TATTCATTGC ATTTCTTTTG CTCTTCTGAA GTGTTGTTTT 
    TTCTGATAAT GGAACCTTGC CTCAGGCTCA TGAACGAACT CTCGTTAGCA 
    AATGCTAGAT CAATGTTAAG CTAATATTTG ATTCGGTTAT TCGGTATTCA 
    AGTTTGTTAC CAATGATGCA ATTGTCTTAG TTAAGTTTCT ATTTTTAGTT 
    TATAACCGCA TGGGGCTCTG TTTCTATAGT TTCTTCAAAT TGAAGTTGTG 
    TGGATTTTTC TCACAATTGG GTTAAAAAAC TTCACTTATG TACTTCCAAC 
    GATAAACTTA AAAGGGACGA TATTAGATTC CCGTGTTCAT TGTGCTTTGC 
    TGCAATGTTT ATTTTGCATT TGGTGGTATT TCTAGCTCGC AGAAATCTTT 
    TTGTCTGAAC TTTTATTGTG ATATTATTTC AGCTAAAACC GGGTTTAAGT 
    GCATATCCTA ATGATCCTCG GCAATCAGCA AACTCTTTAG TAACTCTTCT 
    GGACAAAGCA GAAGCTTCCG TTCCCCGTGA GTTGCGTCCA AAGACTCCTG 
    TCAGAGTTGG GGTATGAAAC GAGTTCTTTC ACACAAAGTC AAG

AT3G04080.1

Model type
Protein coding
Short Description
apyrase 1
Curator Summary
Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY2 causes a complete inhibition of pollen germination.
Computational Description
apyrase 1 (APY1); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 2 (TAIR:AT5G18280.1); Has 1435 Blast hits to 1431 proteins in 229 species: Archae - 0; Bacteria - 35; Metazoa - 605; Fungi - 313; Plants - 348; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
Link
InterPro Scan - TAIR