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GT13890

CSHL Arabidopsis genetrap mutant lines

Original: GT13890

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13890

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 839388 [Map]; Strand: c
      • AT3G03520.1 - [+] show detail - non-specific phospholipase C3
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT13890 - 3-prime edge 
    AAACGGTAGA GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATT 
    TCAGGCATGT GGCAAATACC TAGGACATGC TCATTACAGG AAGCTTTTTC 
    AACAATAAAA TAAAATAAAA CTCAATCATG GAGAATTTTA ATTCATTTTC 
    TTTATGTTTC AATTAAGTAG ACATTGCAAT CCAGGTGTCA TCACCTTTTT 
    TTTTTTAAAA TGTCACTACA ATTCATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 839315 [Map]; Strand: c
      • AT3G03520.1 - [+] show detail - non-specific phospholipase C3
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT13890 - 5-prime edge 
    GAATCTTTCT ATTTGTTGTT TATAAGAAAG TGGAGTAGTT GCTTGGAATA 
    CTTTTGAGTT ATAAGAAAAA AGAAGAAGAA AATGATTTAT AGAAATATTT 
    TGGTTTATTA ACGGGATTAC TAATCTTGAT ATTTGATTTT TAACCTTTCG 
    GATGACAGAG AGAGATTCGA TTAGGTTTTT GCATGTGTCC AACTGTCCAC 
    GGAAAAAATT TACGTTTAGT TAATACTTTT TTAATACTCA TTAAAAGTGA 
    TTAGTGTAAA ATGTAATAAC TTAATCGCTA AGACTCATAT TTAAATTAGG 
    AACATGAGGA AACTGAAGTA CGTGGACAAC TTCCATCAAT ACCACTTAAG 
    CTTCAAGAGG CATTGCAAAG AAGGGAAGCT TCCAAACTAT GTGGTTATAG 
    AACCAAGGTA CTTCAAGATT TTGTCGGCTC CAGCTAATGA TGACCATCCC 
    AAAAACGACG TCGTTGAAGG CCAAAATCTA GTCAAAGAAA TCTACGAAGC 
    CTTAAGAGCT AGTCCTCAGT GGAACGAGAT TCTCTTCGTT GTTGTTTATG 
    ATGAACATGG TGGTTATTAT GACCACGTCC CTACTCCAGT CATTGGTGTC 
    CCAAATCCTG ATGGTCTAGT TGGACCTGAG CCCTATAACT TTAAGTTTGA 
    CCGGCTTGGT GTTAGGGTTC CTGCTTTGCT AATCTCGCCT TGGATCGAAC 
    CTGGAACGGG TACGTATGTT TTGAATTGGA ACCGAGTTGT GTTAGTTTAG 
    ACTTTAGTGT GGTATTGTCA TGTTGGTCAA AACCGGTTAT AATAATTTAC 
    TGGTGATGAC ATTATTTTTT AGTGTTACAC GAGCCAAATG GACCAGAGCC 
    AACGTCGCAG TTCGAACATT CATCAATTCC GGCAACACTG AAGAAAATAT 
    TCAACCTCAA GAGCTTTCTT ACAAAGCGTG A

AT3G03520.1

Model type
Protein coding
Short Description
non-specific phospholipase C3
Curator Summary
Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis.
Computational Description
non-specific phospholipase C3 (NPC3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, Lysophosphatidic acid phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, phosphate metabolic process, response to abiotic stimulus; LOCATED IN: vacuole, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C4 (TAIR:AT3G03530.1); Has 2235 Blast hits to 2112 proteins in 404 species: Archae - 32; Bacteria - 1866; Metazoa - 0; Fungi - 127; Plants - 159; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
Link
InterPro Scan - TAIR