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GT13892

CSHL Arabidopsis genetrap mutant lines

Original: GT13892

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13892

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 124797 [Map]; Strand: c
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: intron7 (CDS)
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: GT13892 - 5-prime edge
    ATTGTTCCCC TCGACGCTCA GGTTGCGTTT AACCTGGAGG AGCTGCTAAA 
    GGCGTCAGCT GCCACAAAGT TAGAACTACA TCATTTGTGG CAACAAATGC
    CAGATGAAGT TTGAAAAAAA AAATTCTAAA GTTTCATTGG GACAAATGAC
    CAAAATCTTA CCCCCAGAAA ATGGATAAAT CTTACAGCAC AAGTGCCCAT
    TTATAAGCTG CTCTAGTTCT TGTTCTTCAG TAAAGTGGGT TTCAGACTCA
    TAAGGCACCT CAGACTCGGT CAAGCCAGAG TCAAGTGTCC CAGAAACTTG
    GCATGCCTTG GCCATAGCCT AAGATAATGA CCAGAAAAGG TTTTAACAAC
    TCAGTCCATG ATGAACCTCA GAAAACAATG CGTTTGGAGA ATGTGGAAAT
    TTTGGATTAA AACTGGCCTA GAAGAATATA TAGTCTAAAT AATACAAAAT
    TATGAAAAAG AAATGTCTGC AGGTACTTGT TTGTAATACC AGTAACCAAA
    CTAACTTGTC ACTATTCCTA ACAAAACTAG AGAAAGGAAA ATCAGATAGC
    AATGGCCTAG GCAGATTAGT ACCAGGTTGT AATTAGCTTA GTAACACACC
    TGGATCAGTG CACAGCTTGA CACCTTATCT T

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR