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Mutant Lines
GT13900

GT13900

CSHL Arabidopsis genetrap mutant lines

Original: GT13900

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13900

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 22075334 [Map]; Strand: w
  - AT3G59760.1 - [+] show detail - O-acetylserine (thiol) lyase isoform C
    Distance: 0; Region: exon1 (CDS)
  - AT3G59760.3 - [+] show detail - O-acetylserine (thiol) lyase isoform C
    Distance: 0; Region: exon1 (CDS)
  - AT3G59760.2 - [+] show detail - O-acetylserine (thiol) lyase isoform C
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT13900 - 3-prime edge
```
TGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT AATGGTGGCG 
ATGATCATGG CTTCAAGGTT TAACCGGGAA GCTAAGCTCG CATCTCAAAT 
CTTGTCTACA CTTTTGGGAA ACCGAAGCTG CTACACATCC ATGGCCGCCA 
CATCTTCCTC TGCTTTACTT CTTAATCCGT TGACTTCTTC TTCTTCATC
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 2343782 [Map]; Strand: c
- AT3G07340.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -312; Region: promoter

CTTTCTCCCT GGACAGGGAA CCCATTCGTC AAAAGTAGTT TGTTATTCGT 
TTACCGGTTT TTGATATTAG TACCAGATTT GTTTTTGACA TCTTAAAGAA 
CGTTAAGATT GTTTCGTACT ATTTAATAGT TTCACACTTA TTTTATACTG 
TATTTAGAAG CTTGTTTCTC CAATTATCTC ATTTGGTAAA GACGTTTCAT 
TAGCGATATC GTGTTAACGT CGAAAGTCCT CCTCTCGTTA CGGTCCGGTC 
CGACACAGAA ATTTTTATTT AATATTTACT TTATTTTTTG TCCATTTATT 
AGAAAGAAAG TCATTGATTG GTGCAATTTA TTAATATAAA TTTATTAAAC 
AACTATATAA ACTCCTCATT ACTGCCCATT AACGAGCTTC CCTTTTCCTC 
TGTTCTTCAC TTTAAGAAAA TTACAAACTT TTATCTTCTA TTGGACGAAT 
CTTTGATCTG GTTTTAATTA ATCACACGCT TACTTTAGGA TTTTTTTACC 
TGAATTCGAA TATATACTTT TGATTTTCAT

AT3G07340.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G59760.1

Model type: Protein coding
Short Description: O-acetylserine (thiol) lyase isoform C
Curator Summary: Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasC
Computational Description: O-acetylserine (thiol) lyase isoform C (OASC); FUNCTIONS IN: protein binding, cysteine synthase activity, zinc ion binding, ATP binding; INVOLVED IN: cysteine biosynthetic process, pollen tube development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase B (TAIR:AT2G43750.2); Has 22520 Blast hits to 22503 proteins in 2668 species: Archae - 432; Bacteria - 15729; Metazoa - 413; Fungi - 668; Plants - 568; Viruses - 2; Other Eukaryotes - 4708 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G59760.2

Model type: Protein coding
Short Description: O-acetylserine (thiol) lyase isoform C
Curator Summary: Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasC
Computational Description: O-acetylserine (thiol) lyase isoform C (OASC); FUNCTIONS IN: protein binding, cysteine synthase activity, zinc ion binding, ATP binding; INVOLVED IN: cysteine biosynthetic process, pollen tube development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase B (TAIR:AT2G43750.2); Has 22651 Blast hits to 22634 proteins in 2657 species: Archae - 442; Bacteria - 15920; Metazoa - 415; Fungi - 665; Plants - 567; Viruses - 2; Other Eukaryotes - 4640 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G59760.3

Model type: Protein coding
Short Description: O-acetylserine (thiol) lyase isoform C
Curator Summary: Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasC
Computational Description: O-acetylserine (thiol) lyase isoform C (OASC); FUNCTIONS IN: protein binding, cysteine synthase activity, zinc ion binding, ATP binding; INVOLVED IN: cysteine biosynthetic process, pollen tube development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site (InterPro:IPR001216), Cysteine synthase A (InterPro:IPR005859), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Cysteine synthase K/M (InterPro:IPR005856); BEST Arabidopsis thaliana protein match is: O-acetylserine (thiol) lyase B (TAIR:AT2G43750.2); Has 22643 Blast hits to 22626 proteins in 2678 species: Archae - 432; Bacteria - 15847; Metazoa - 414; Fungi - 670; Plants - 570; Viruses - 2; Other Eukaryotes - 4708 (source: NCBI BLink).
Link: InterPro Scan - TAIR