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GT13905

CSHL Arabidopsis genetrap mutant lines

Original: GT13905

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13905

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 104224 [Map]; Strand: w
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon2 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT13905 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTATCAC CACCACCTAC 
    AACACCGGCT TAAGATTCGG CGGCACTGTC ACTCTGGTCT ACGGATGGTT 
    CCTGGCCGGC TCCTTCACAA TGTGCGTTGG GTTATCTATG GCCGAGATCT 
    GCTCCTCTTA CCCTACCTCC GGTGGTCTCT ACTACTGGAG TGCTATGCTC 
    GCTGGCCCTC GTTGGGCTCC TCTTGCCTCT TGGATGACTG GCTGGTACTC 
    GGTACTCCCT TCTCTCACCT TTTTCTTAAT TTGGAATTGG AAGCAAGAGA 
    GCGTCTCTCT CTGACTCATT TTCACAAATC TTTTTTCAGG TTCAACATCG 
    TTGGTCAGGT GCAACATTCA TTCAAGCAGA CTTGTTTTCA TTAGATATAT 
    CTCTCATTGG GGCTAAAAGT AAGGTTGTGG TGTGTTTGCA GTGGGCAGTG 
    ACGGCCAGCG TTGACTTCTC TCTGGCACAG TTGATTCAGG TGATCGTCCT 
    TCTCTCCACC GGCGGTAGAA ACGGCGGCGG TTATAAAGGA TCAGACTTTG 
    TTGTGATTGG TATCCATGGT GGGATCCTCT TCATCCACGC TCTTCTCAAC 
    AGCCTCCCCA TCTCCGTCTT GTCTTTCATT GGACAGCTTG CTGCTCTTTG 
    GAATCTCCTC GGTACCCAAT CTCTCTTTTG TCTCTGTGTT TCATCTCACT 
    CGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 104319 [Map]; Strand: w
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: intron1 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT13905 - 5-prime edge 
    GAGCACCGAT ATGATGGAGA AGGAGATGGC GAAATTGGAG AAGACCCTGA 
    AATCTAACAA TTGTTTAGCT AACACAAATC AAAGAAGAAA AAGGAAAGAG 
    TGGCGGAGAC AGACGAGAGA TCGCGCTTGA GCTCTTGCTT GTAGCCGAGC 
    TCCTTGAGGC GGACTTGGCC GGAATCCATG ACGGGAATAA AGGATTGATC 
    GCCGCCCAAT CCCATAGTCT TCCTGGCCTG AGAGTCCAAA GCTTTGGTTG 
    TTGAGAGCTC TCTCTCTGAT TCAGACAAGA TATTTATTTT TCTGTTATAT 
    TACTTTTTAC ATCCCCCTCC AAACTGTCTT TTTATTATTA TTTATTCTTT 
    AAACTAAATA AATTTGTATT TCAGGTATTT AAAAAAACCT AATAACCACC 
    CCCAAGGGTT AAAACCCTTA AGGAATCCTT AAAAAT

AT2G01170.1

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 15465 Blast hits to 15422 proteins in 1894 species: Archae - 296; Bacteria - 11987; Metazoa - 438; Fungi - 2169; Plants - 254; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01170.2

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR