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GT13918

CSHL Arabidopsis genetrap mutant lines

Original: GT13918

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13918

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7303846 [Map]; Strand: c
      • AT4G12290.1 - [+] show detail - Copper amine oxidase family protein
        Distance: -559; Region: promoter
    Flanking Genome Sequence: GT13918 - 3-prime edge 
    TTTCATCCCT AATAAAGACA AAGGGAACAA AACTGCAGAG ATGACGAAAG 
    CTTGTACGGA GGAGATAGCA CTCTCCAATC AATTCTCAGC CCTTGATGGC 
    TTAGAGACAT CAAGATGAAG ACATGTGTAA GGGTTTATCT AGGGTTTTAG 
    TTCACATATG TCCTTGTATA AAAACCCAAA CAATAGCCGC TTGTAATCTC 
    TAAGAAGCAG AATGAATGAA AACCAAAACT TTTCATAAAG ATTTATAAAA 
    TTCTTCATTA TCGACATCAT GAGCCTCTTG GGCCTTCATC ATTCTTCAAA 
    ATCATACCAT AGTTTATAGT TTTTACTGCG TACCACAAAT ATGGCACCGT 
    ACATATATCA TTATAGGTTT CTAGGAGTTG ACAAATGTTT AGTCCTCCAT 
    TTTTCAATCG TCAAAGATAA GATTCCTTAT AATTCGTGTA CATAATTGTT 
    TTTTTATATA TACATAGCAT GTGGTAGATA TTTTATTTCG GGATTGATAT 
    TTGTATATCT CTTTATACTG AGAGTGTGAG GTGACGTACT TAGTTAAGGC 
    TCACTAGTTT CTTTAAATTC TATATAATAC GATAAACAAT TCCTATGATC 
    TTCACTCTCC AAAGAATCAA AACAAAAAAA

AT4G12290.1

Model type
Protein coding
Short Description
Copper amine oxidase family protein
Computational Description
Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G62810.1); Has 1550 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 243; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).
Link
InterPro Scan - TAIR