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GT13924

CSHL Arabidopsis genetrap mutant lines

Original: GT13924

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT13924

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2324862 [Map]; Strand: c
      • AT4G04610.1 - [+] show detail - APS reductase 1
        Distance: -141; Region: promoter
    Flanking Genome Sequence: GT13924 - 5-prime edge 
    CCTACTTTAT CCCTGCCATT GGTTTGTTTT TGGTAACTGC GAATATTCTG 
    GTCCAAGTTG ATGACGTGGA AGGTTTTAAT TGGATGAATT TATTTTTAAA 
    ATCATCTCTG ATTTGAAGGT AGTCAATTTT GGCAGAACCA ATCAAAATTT 
    ACCAGATTAA ATTCATCACT TTTGGAGAAG AGATCCCTTC CAACATGCCT 
    CGAACCCAAC ACCTCCACCT GAAAGATTTA CCAGTGGACC AACAGCTTGT 
    TGGTAAAAAT ATACATTATT ATAAATCGAT AATATACTCT TTTTCTTGAT 
    AAAGATTTAT ACATTCTTCT TTTTTTTTTT GGAAAAAAAA AATTCTTCCC 
    TTTAAAACAA AAAAATTTTT TAAAAAATTT TTTTTTTTAA AAAAAAAAAA 
    ACCCTTTTTT TTTTTTTTGC CCCCCTTTTT TTTTTAAA

AT4G04610.1

Model type
Protein coding
Short Description
APS reductase 1
Curator Summary
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.
Computational Description
APS reductase 1 (APR1); FUNCTIONS IN: adenylyl-sulfate reductase activity; INVOLVED IN: response to oxidative stress, sulfate reduction, sulfate assimilation; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Thioredoxin-independent 5'-adenylylsulphate reductase (InterPro:IPR004508), Thioredoxin fold (InterPro:IPR012335), Phosphoadenosine phosphosulphate reductase (InterPro:IPR002500), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: APS reductase 3 (TAIR:AT4G21990.1); Has 5999 Blast hits to 5419 proteins in 1658 species: Archae - 169; Bacteria - 2693; Metazoa - 1288; Fungi - 563; Plants - 600; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink).
Link
InterPro Scan - TAIR