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GT13930

CSHL Arabidopsis genetrap mutant lines

Original: GT13930

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13930

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 654532 [Map]; Strand: w
      • AT4G01516.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 4575; Region: intergenic
      • AT4G01520.1 - [+] show detail - NAC domain containing protein 67
        Distance: 1875; Region: intergenic
    Flanking Genome Sequence: GT13930 - 3-prime edge 
    CGACCGTTAC CGACCGTTTT CATCCCTACA TATATAGCTA ACTCTAAACA 
    AGAATCTGAA ATCTAGGTAC AATCTAACTA GTTACAACAA TCTTTGCCTT 
    TGTTACGGAG TTGATCGCAA CCTTCGAATA TTTGCAGTAT CTGTGGAATA 
    TGCTGAATTT GAGTAAACCA ACTTGAACCA AACTTCATCT CACTCGACAA 
    CCAACTCTCA ATACCCTCCC TCAAGCTGGA GCATACAAAT TTTGTATCCC 
    AAGCTTGCAT CGAAAACGCC AAAAGCCATC TCTCCCAATT GGTTTAGTGA 
    AGATATCAGC AAGCTGAGAC CTTGTATCAA CATGTTTCAA ATGGATATTG 
    CGAGTGACAA CTTCATCTCT CACGAAATGA CAATCGATCT CAATGTGTTT 
    TGTTCTTTCG TGAAAGACCG GGTTTGTAGC AATGTGAATT GCTGACTTGC 
    TATCGCAGCG GACTATCATT GGCTGGTCGT GTTTCACTCC AAGAGTACCC 
    AACATACGTT TCAACCATAT CAATTCTTGA ACGAGATTAG CAAGTGACCT 
    GTATTCTGCC TCTGCTGAAG ACCTACTCGT TGATCGTTGT TTACGTGTCT 
    TCCATGCAAC AGGTGACTCC CCAAGTTGTA CAAAATAGCC AGTGACGGAA 
    CGTCGAGTTA AGCGACATCT CGCCCCAGTC CGAATCACAC CACCCTGTGA 
    TTTGAAAGTT ATTATCAGCT CTTAACAGAA TTCCCTGTCC TGGATCAGAT 
    TTCAGATACC GAACTACACG CAGTGCGGCC AACCAATGAT CT

AT4G01516.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01520.1

Model type
Protein coding
Short Description
NAC domain containing protein 67
Computational Description
NAC domain containing protein 67 (NAC067); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC with transmembrane motif1 (TAIR:AT4G01540.1); Has 2752 Blast hits to 2745 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2752; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR