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GT13936

CSHL Arabidopsis genetrap mutant lines

Original: GT13936

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13936

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23367058 [Map]; Strand: w
      • AT3G63240.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT13936 - 5-prime edge 
    TCCTACTTTC TCCGAAGAGG TCAATGTGAG ACCACTTCTT CTTATAAACA 
    GAGGAGGAGG TTAAGGGATT CTCACTCTTC CTATCCTATA TTCCTATGCA 
    GGAACAAGGA ACCTCGTTTC AGACCAAACT GCTTGTTGTT GCTTTGCTGT 
    TTGTTTGTTT CTTTGAACGC CAAATCCAAG AAGGGGCAAA AGAAAGACAA 
    CAACTTTGGA ACCCGAGTTC AGAGAGATGG GTATTCGGGT ACAGCCCGGA 
    TTTTCCTCTT CCTTTCTTCT TCTTCTTCTT GCTTCTTGTT TTCTGAAATG 
    TATCCGTACT CTCGCTCTCT CTCTCTTTCT GTGTCTTTAA AGAAGAAACG 
    GATCATATGA CTCTCTCTCT CTCTCTCTCT CCACAGCTTC TTCTTCTTCT 
    TCTTCTTCTT CTGCATCTCT CTCTCTCTCT CTCTCTCTTT CGTGCATAAA 
    AAAGTGTGGG CCCCACCCTT TTTTGAAGAA ATGTAATAAT AAATCCGATG 
    TGCACCCGTT TTTTCCTGTA GCGGGGCGGC ACACACCACC CGGAAACTCT 
    CACAATGTGC ATTTTCTAAA TAACACCAAC AAAAATTGCT TGTCGCCGCT 
    GTGTATATAG AGAGAGAGAG AGTTTGTGCT CTCTCCC

AT3G63240.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 2363 Blast hits to 2040 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 600; Plants - 662; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).
Link
InterPro Scan - TAIR