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Mutant Lines
GT13940

GT13940

CSHL Arabidopsis genetrap mutant lines

Original: GT13940

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13940

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 2939121 [Map]; Strand: c
- AT3G09560.1 - [+] show detail - Lipin family protein
  Distance: 0; Region: exon1 (5UTR)
- AT3G09560.2 - [+] show detail - Lipin family protein
  Distance: 0; Region: exon1 (5UTR)
- AT3G09560.3 - [+] show detail - Lipin family protein
  Distance: 0; Region: exon1 (5UTR)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CACAGATTAG GAACTCTGAG 
CGGAGAATCC GAGAAAAATC AAAACACGGC GGAAGAAACG ACGAATCAGT 
AATCGAGATT ACTATTGAAA ATGAAATGGA TTTTAATGAA TTGTATCCTA 
TACTAAGAAT TTCATTGAAA TTTCTCTCTC GGGGGATAAA AAAAAAATTT 
TGGGTTGATA AAAAAATTCT CGGAATTTTT AATGAAAGTC AAAAAGGATT 
TGTCTTTGCT TCAACAATTG TTTTTTACCG CTCCCGGGGG GAGAAATTTA 
TAAAAAAAAG GAAAAAAATG GTTGTTTTGG ATAACCAAAA CAAATTAAAT 
CCCCCATGAA CTTAAAAAAC TGTAATTGCT TATATAAAAT GATGAAATGA 
CTCTGTGAAG GGAGGAGGGA AAATTACAAA AAGGGTCTCT CTTCAACTTT 
TGTCGAAATT ATTGCTTCTC TAAAAGGGTA CTTTTGGTTT TTCCATATTA 
AAACCTGCAA AAAAATATGC TTGATTTTAC ACAAAAAAAA ACAAATATGC 
TCAATTAATA TATTTTTGAC CACAAAAATT AAGTTTCCCC CTTTTTTTTG 
TTAAAATCTC CTTTTAAAAA CACCGTTAAA ATCTATTATT TTTTTCACTT 
CTGGAGAAAA AATGAAAAAA AAGTTTTATA AAAAATTAAA

AT3G09560.1

Model type: Protein coding
Short Description: Lipin family protein
Computational Description: PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 (PAH1); CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphohydrolase 2 (TAIR:AT5G42870.1); Has 5210 Blast hits to 3195 proteins in 460 species: Archae - 22; Bacteria - 1897; Metazoa - 1353; Fungi - 717; Plants - 207; Viruses - 16; Other Eukaryotes - 998 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G09560.2

Model type: Protein coding
Short Description: Lipin family protein
Computational Description: Lipin family protein; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphohydrolase 2 (TAIR:AT5G42870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G09560.3

Model type: Protein coding
Short Description: Lipin family protein
Computational Description: Lipin family protein; FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: LNS2, Lipin/Ned1/Smp2 (InterPro:IPR013209), Lipin, N-terminal conserved region (InterPro:IPR007651); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphohydrolase 2 (TAIR:AT5G42870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR