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GT13950

CSHL Arabidopsis genetrap mutant lines

Original: GT13950

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13950

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 85000 [Map]; Strand: c
      • AT4G00200.1 - [+] show detail - AT hook motif DNA-binding family protein
        Distance: -306; Region: promoter
    Flanking Genome Sequence: GT13950 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAAATGTGA TTGGTAGGTG 
    ACAGATAATA AAGTGACAAG CTGTCAGATT AACAAGCCGT TTGTTTGACC 
    TTCTCTGCCT TCTGTCTCCT TTTTGACTCC CTCTGACTCT TTCTCTTATA 
    TTGCTTTCAC TTCCAAGAAA AGAATAGAGC ATTTGTGATT TTAAATAATT 
    GTGTGTTAAA TAAGAATTTA TCCGTATCTC AATTAGGATC ACGGCACATG 
    AGAAAGCTTT TGGATCATTC ATCTCACTCG ACCAACTCCC AATTGGTTTA 
    GTGAAGATAT CAGCAAGCTG AGACCTTGTA TCAACATGTT TCAAATGGAT 
    ATTGCGAGTG ACAACTTCAT CTCTCACGAA ATGACAATCG ATCTCAATGT 
    GTTTTGTTCT TTCGTGAAAG ACCGGGTTTG TAGCAATGTG AATTGCTGAC 
    TTGCTATCGC AGCGGACTAT CATTGGCTGG TCGTGTTTCA CTCCAAGAGT 
    ACCCAACATA CGTTTCAACC ATATCAATTC TTGAACGAGA TTAGCAAGTG 
    ACCTGTATTC TGCCTCTGCT GAAGACCTAC TCGTTGATCG TTGTTTACGT 
    GTCTTCCATG CAACAGGTGA CTCCCCAAGT TGTACAAAAT AGCCAGTGAC 
    GGAACGTCCA GTTAAGCGAC ATCTCGCCCA GTCCGAATCA CACCACCCTG 
    TGATTTGAAA AGTTATTATC AGCTCTTAAC AGAATTC

AT4G00200.1

Model type
Protein coding
Short Description
AT hook motif DNA-binding family protein
Computational Description
AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 772 Blast hits to 768 proteins in 34 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 0; Plants - 749; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR