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GT13979

CSHL Arabidopsis genetrap mutant lines

Original: GT13979

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13979

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 288995 [Map]; Strand: c
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT13979 - 3-prime edge 
    TTTCCGACCG TTACCGACCG TTTTCATCCC TAATTGTGAA AATGAGGTAA 
    CAAAAATCAA GAATGATCAA AGAAAATCGA AAACGAAGAA AGACTTGGTC 
    ATTGGTTGAT AGTTTTCCTC CCTCATATTT TTCAGGTACG ACCGGCTGAG 
    ATCTGTGGCC GGGAAGGTAC AGTCGGTGGC TGGAGACATA GCCGCACAAG 
    GAGAGCGAGT GCAAGCGTTG CTGAGCTGGC GTGATCCACG CGCCACCGCA 
    ATATTCGTGA CGTTCTGTTT CATTATTGCC ATGGCTCTCT ACATTACCCC 
    TTTTAAACTT GTCGCTCTCT TATCCGGCTA CTACTTCATG CGACATCCAA 
    AGCTCCGACA CCGCATTCCC TCCGCTCCCG TCAACTTTTT CCGGCGACTT 
    CCAGCCATGA CCGACTCTAT GCTGTGAATC TTCTTCTGGA TAGAGTAATC 
    AACAAACATG CCATGTATAT AACTCTCTTC TTTGAATCTG TATCTATCTA 
    TCGATATGCA TCTATATGTG TTGACAATCA TGCGTTCGTG AACTCGTTCT 
    CCGAATTAAC AATGGTGATC GCAAACAAAC TCTGATGATC AAATCAAATA 
    AATTGCTTCC ACACTCGCAA TGTTGAAACA GAGAATCTAA AAGCTCAAAA 
    CAGAGTCGGT TAGATCCTAA CAAACTCTTT AAACCATCTC CAATTCGCAA 
    CCAAAGCTAA ACCATCGCTT CCACAAAACT AATTGGTCGA TAACCAGCCT 
    AAACCCGGTT TGATTTAAGC TGAACCAGAT CCGTGTGATC AATATATAAA 
    AAAGCCCATG GGCCTTGAAC AAAACAACGT CACATCGGTG ATTAACACTG 
    TTTTTAGTGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 288899 [Map]; Strand: c
      • AT4G00700.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13979 - 5-prime edge 
    GGAGCCCTTA CGCGTCGGGA AGGTATCAAA CTCTTCGTCA AGTTCATCAG 
    AATTTACATT GTCTGCATAA GATAGTTTGG CGTCCATATG AGGAGGAAAT 
    CTAGGCTTAA ACCTGTAATT CCACATCCCA ATCACAGCCA TATACAGAAA 
    CACAGTCGGC AAAATCATCT CCGGGAACGT CACAAGCATA GTGTAGAGCA 
    CGTGCACCAG AGCCGTCGTC ACGGGAGTCT TCCATGTGCA CACTTGTTCC 
    ATCCATTTCC AAACAGACAG CGCACCGGAG AACACTGTCG TGAACCTATT 
    GAAGTTGGCT TTGCTTCTCC TCATGCTGAA CAGCTGACTT TTCCAATCTG 
    TCAAATAGTC AACCACTTCC CGTCTCAGCG GTGGCTCGGA CCGGCCTAAA 
    CGAACAATAA TTATGTTGAT AGCCTGCATC TTAAGAGCTT CCTGTTGGTT 
    TGTGGATAAG GGTAGAATGT AATGCATTTT AGGCAGGAGA GGTTCTGTGT 
    ATTTCATCAC CATACTGGAG ACCGATGTGC AGGTGAATCT CACCGATAAG 
    TGAAGCTCTC CTCTTTTCTT AAGACCAGTA GGTTGTAGAA CAAGTAAAGG 
    GTAAAGCGTG CGTGTACCCA CGGCCCGTCT GAAGAGTCGA GAGTCTAATG 
    CGGACT

AT4G00700.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Computational Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR