Home
Mutant Lines
GT13991

GT13991

CSHL Arabidopsis genetrap mutant lines

Original: GT13991

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13991

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 7303824 [Map]; Strand: c
- AT4G12290.1 - [+] show detail - Copper amine oxidase family protein
  Distance: -581; Region: promoter

TTTACCGACC GTTACCGACC GTTTTCATCC CTAATAAAGA CAAAGGGAAC 
AAAACTGCAT AGATGACGAA AGCTTGTACG GAGGAGATAG CACTCTCCAA 
TCAATTCTCA GCCCTTGATG GCTTATAGAC ATCAAGATGA AGACGTGTGT 
AAGGGTTTAT CTAGGGTTTT AGGTCACATA TGTCCTTGTA TAAAAACCCA 
AACAATAGCC GCTTGTAATC TCTAAGAAGC AGAATGAATG AAAACCAAAA 
CTTTTCATAA AGATTTATAA AATTCTTCAT TATCGACATC CTGAGCCTCT 
TGGGCCTTCA TCATTCTTCA AAATCATACC ATATTTTATA GTTTTTACTG 
CGTACCACAA ATATGGCACC GTACATATAT CATTATAGGT TTCTAGGAGT 
TGACAAATGT AAAGCCCTCC ATTTTTCAAT CGTCAAAGAT AAGATTCCTA 
AAAATTCGCG TACATAATTG TTTTTTTATA TATACATAGC CTGTGGTAGA 
TATTTTAT

5 prime edge [+] show sequence

Chromosome: 2; Position: 18939245 [Map]; Strand: w
- AT2G46040.1 - [+] show detail - ARID/BRIGHT DNA-binding domain;ELM2 domain protein
  Distance: -798; Region: promoter
- AT2G46050.1 - [+] show detail - Pentatricopeptide repeat (PPR-like) superfamily protein
  Distance: -17; Region: promoter

CTGTATAGAA ATAGATAGAG TCACTTATTA TTACAGTGAT GTAAAACCAA 
TTTTCCCGCC ACGCCGTCTC TTTTTTTTTG TTTGAGAGAT GCGTTTTACA 
TTCCTCCGAT CAACTCGGAT CTTCCTTGCG AACCATCAAA ACCACTTATC 
ATCCTTGCAA AACATTAGAA CCATTCCTTC TTCTTCTTCT TCACCGGTAG 
CTATATCCTC TGTATCGAAG TTATCTGCTA GCTGGGATCA TCTCTCTGAC 
GTGAAACAAG AACATGGTTT CATGGTAAAA CAAGGGATTT ACAATTCTCT 
GTTTCTTCAA AACAAGCTCT TGCAAGCTTA CACGAAAATC AGAGAATTCG 
ATGATGCAGA TAAGCTCTTC GACAAAATGC CTTTGAGAAA TATTGTTACT 
TGGAACATAC TGATTCACGG GGTCATTCAA CGAGACGGTG ACACCAACCA 
CAGAGCTCAT CTAGGTTTTT GTTATTTGAG TCGGATTCTT CTCACTCGAC 
A

AT2G46040.1

Model type: Protein coding
Short Description: ARID/BRIGHT DNA-binding domain;ELM2 domain protein
Computational Description: ARID/BRIGHT DNA-binding domain;ELM2 domain protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: sperm cell, male gametophyte, cultured cell, seed, pollen tube; EXPRESSED DURING: M germinated pollen stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ELM2 (InterPro:IPR000949), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain;ELM2 domain protein (TAIR:AT4G11400.1); Has 198 Blast hits to 184 proteins in 31 species: Archae - 0; Bacteria - 1; Metazoa - 35; Fungi - 2; Plants - 156; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G46050.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR-like) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G68930.1); Has 38266 Blast hits to 13184 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 35; Plants - 37737; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G12290.1

Model type: Protein coding
Short Description: Copper amine oxidase family protein
Computational Description: Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G62810.1); Has 1550 Blast hits to 1547 proteins in 275 species: Archae - 14; Bacteria - 376; Metazoa - 251; Fungi - 449; Plants - 243; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).
Link: InterPro Scan - TAIR