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GT13992

CSHL Arabidopsis genetrap mutant lines

Original: GT13992

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13992

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18454976 [Map]; Strand: c
      • AT5G45530.1 - [+] show detail - Protein of unknown function (DUF594)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT13992 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACATCAA CGTATCAACT 
    TCCATCAATT TCGAATCTCG TAAAGCCCAT TCTCCTCTCG CCCAAGACAC 
    TTTCTTTGCA ACTTCAGGCG TTTCCGCAAA CCCCGACTTA TCCTTGACCT 
    CATTGAATAT AAACTCCCAT TGATTCTTCG TCAAAGGCTC TCTCGAAATG 
    AACCTAATCC CGTCTAGATA AGATGTAACA CTAAAGATTC GATCAATGTA 
    TTTCCAAAGA ACTCTGAAAA CTTCAGGAAT ACCGGCAAAG AACACGAGGT 
    ATAACGGGTA AACTGTGCAA CGAATCATCG GATTCTTCTT AGACCATTGC 
    CGGAGCACGC TTCTTATTGA TCTATTAACA TTCTTGATCC ATCCAATCAT 
    CATTTGGATT CTTCATCTCA CTCGACCAAA TAGCGAAACC ACGTAATCCC 
    ACACTAATAG GTTACAGTTT CTCTTCTGGT GGATTCTTGA AACTTTGGCT 
    TTAAGACAAA ACCCGATGAA GTTAAATCCG TAGATCGTGC CTGACCATCT 
    ACGTGTAAAA AACCCCGTCG AGAGTACCTC GTGGGTTTGG TTTCCGTTGC 
    ATGTATGCTT CTTCCAACGG GGTTTCCTAA ACTCGAGAAA CCAGTTGAAA 
    AAAGAGTCGA TAGAAGTACT CTTTTCCTCT GGATCATCCT TAAGGTTTCT 
    TAGTACTGGC GAATGTCCAA TCCGAGAGCA AGAAAATGAC CATTGACGCA 
    AGATCAAGCG CGATACCAAC TAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18454889 [Map]; Strand: c
      • AT5G45530.1 - [+] show detail - Protein of unknown function (DUF594)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT13992 - 5-prime edge 
    ATGCGTTACA TAGAGAAAGT TGATTATGAT CAAAGTCTTC TCCTTTGGCA 
    TATTGCTACT GAGCTCTGTT TTCAAAAAGA AGAAGGTGGG AAGATGGAGA 
    AGCTGAGCAG AGAAGGTTAT GATGACCGAG AATTCAGCAA GATTATATCG 
    GACTACATGA TGTATTTGTT GATAATGCGA CCGAAGCTAA TGTCGGAAGT 
    GGCGGGAATC GGGACTATAC GGTTTAGAGA TACTAAAGCT GAAGCTGAGA 
    GGTTTTTCAA AGGACGGCAA ATCAAGGACT TGAGAGATAT GAAAAGAGCG 
    AGTGAGACGG TTTTATTGGT TAGTAACGAT ATTGAGCCGA TACTTGTGAA 
    GGGAGATCGA AGCAAGTCGG TTCTTTTCGA TGCGAGTATG TTGGCGAAAG 
    AGCTTCAGAA TTTGAAAGAG AGTAGTAATG AAGATGGGAA ATGGAGAGTG 
    TTGAGCAAAG TGTGGGTTGA GTTGTTATGT TACGCAGCAA GTCATTGTAA 
    AGCGACGGAG CATGTGGCGC AACTTAGCAG AGGTGGTGAG CTACTTAACT 
    TTGTTTGGTT GTTGATGGCT CACTTCGGAT TAGGAGATCA GTTTCAGATC 
    AATAAAGGTG ATGCTAGAGC TAAACTCGTT GTAGGAGAGG GATAGTTATA 
    ACCCAAAAAT AAAAGATTTA TCTTTGTATT TTATTTATAT TTTGTGTGGG 
    TGGGGTGGGA AAAGGGTATT TTCGTAACGA TGTATTTTCA TACTCGTCAT 
    AATTCACATG GATTCCTGAC TTAGCTTTTT CACGGTTTTG ACTAACACCC 
    GTTAGT

AT5G45530.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF594)
Computational Description
Protein of unknown function (DUF594); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45470.1); Has 1338 Blast hits to 867 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR