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GT14003

CSHL Arabidopsis genetrap mutant lines

Original: GT14003

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14003

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25295147 [Map]; Strand: c
      • AT1G67500.1 - [+] show detail - recovery protein 3
        Distance: 0; Region: intron8 (CDS)
      • AT1G67500.2 - [+] show detail - recovery protein 3
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: GT14003 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATTACA GGGAGGGGGA 
    CACTTAGTAT CTAAGGTTTG GTTGGGAAGG GTTCAAGAGC AAATATATAA 
    GTGAAAAGTA GCTGAAAACT GACAAGTAAG GAAGGCTTCA GGGCACCAAA 
    AGACTATTCT CAAATTATTA TATATAGTTG TGGTTGGATC AGCATTACTT 
    ATTAACATGA ATATGTGCAT GACTATCCCA TAGAAAAAGT ATCCCCCCAG 
    CTCCGTTTTT CATTTTAATT ACATTTTGAT GGTACATAAT CCGTAGCAAT 
    TTTGACAGAA TAACTTTCAT ATCTGAAATT GCTAAGTTTG ACAAAATCCT 
    AGTCACTAAA CGATTTCTTT GGAATACATA ACAACGAAAA ATTACCAGAA 
    ACTGGAGAAT AAAGGGAATA TGAGACTCGT AAGGCTGCAA ACTTTTACCA 
    AGAACAGCAC CTGCCTAGAG AGGAAAATAA AAAGAGTTAT CAGCATACTA 
    TTTTCACCAA AATTATATGC ATCATACATA AAGTACAGAA TAATGGCGGA 
    GTGGAATCAT CAAGATATCG TACCAGAAGA AGACTGGCAG CACGAGCCAC 
    ATCGGGTGGA TGGTAGCTAC TATACTGTTA AGGTGATTAA ATGATAAACT 
    GCTCAAGAAA ATGGTATTGC TCGAAAATTA AATATACAGG ATACAGATAA 
    ATCTTCACAA AAGCCTCCTC TGTTGAGTGG TACCCATAAA ACTTCTTTGC 
    TCTTACAATC TCACAATCAT GGATATGTTG CCTTTTTGAA GC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25295067 [Map]; Strand: c
      • AT1G67500.1 - [+] show detail - recovery protein 3
        Distance: 0; Region: exon9 (CDS)
      • AT1G67500.2 - [+] show detail - recovery protein 3
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: GT14003 - 5-prime edge 
    CTGCCTGTAT TCCACGACAG TTTGTCTGCA TTTCAATACT GAAGTTTCTG 
    TGATTTTCTT CTATAGGTTG ATTATAATTT GTATGGAATG GGTCATGTGC 
    ATATATCAAA GATGAAGTTC CGTAGCCCAG TGCCTCACCA TTTCCGGCCA 
    AGGAGATTTG ATTTGGATGA TTGTCCGGGA CAAAGGATTG ACGAAGTGGC 
    TATTACAAAG GTAGATCTTC AAATACTTGA TGCTTTGCGT TATATTGTGT 
    GGTAGTTTTA TCTTCTTTTA TATCACAATA CTGAAACAAT GTAGCAGGCA 
    AATTCAAGTG CTGCTGCAAG CGTCAGTTTT CCTGTTTGGA GCTTGTCAAC 
    AATCCCAGGT CAGTGGATGT GGAATCTCTC TGAAGAATCT GATACACCGT 
    TGAGCCAGAG CCAGCATAGG CACCAACACC ATTACAGACG TCAGAGTCTC 
    TGTGAACTTG AGGGAGATGC TACTATTAGT GGTAATTTTC CTGATTCGAA 
    ATTTAATTGT TTGTGTTTCA TGTATGACCG GACGTTTGAA CTAGCCTCTT 
    CTCTTGTAGA TATTCTCAAT CAACAGTTTA AAATGTACAA CTCCCTTTCA 
    CAAGCCCAGT CTGATACTAA CATGGTTCAG TCGCTTGTGG CAATTTGGGA 
    GGTTCATTCT ACTTTCTTGG TTCTACTTTG AAATTATTTA GTTGGTATTA 
    CCTTGCCTAA CCTCGTCACT TTTGTTCAGG AGGAGTATGA AAGGACTGGT 
    GTGCGTGATG CACCTATACC TCCTGATCCT GGTAAACCCT CTGCAGCTGA 
    TGTGTTGCAG ACTATGTCAG ATTATGTTGG GTTTGGGAAT ATGCTTAAAG 
    AAATGCTAAA CAAAGTTGAA TTGTCTCCGC CTGGTATGAA GCCTACTGCA 
    GTATCTTCAG CTGGTCCAGA TATGCATGCC AAACCTGAAA TTACTGATCT 
    ACAGGCTTTG AATCATATGG TTGGTACATG CAGTGAGTTT CCTG

AT1G67500.1

Model type
Protein coding
Short Description
recovery protein 3
Curator Summary
Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).
Computational Description
recovery protein 3 (REV3); CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1); Has 6179 Blast hits to 5524 proteins in 1389 species: Archae - 386; Bacteria - 883; Metazoa - 612; Fungi - 614; Plants - 201; Viruses - 2029; Other Eukaryotes - 1454 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G67500.2

Model type
Protein coding
Short Description
recovery protein 3
Curator Summary
Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).
Computational Description
recovery protein 3 (REV3); CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1).
Link
InterPro Scan - TAIR