1. Home
  2. Mutant Lines
  3. GT14014

GT14014

CSHL Arabidopsis genetrap mutant lines

Original: GT14014

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14014

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6214890 [Map]; Strand: c
      • AT3G18140.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -105; Region: promoter
      • AT3G18140.2 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: -105; Region: promoter
      • AT3G18145.1 - [+] show detail - pseudogene, similar to putative carbamoyl phosphate synthase small subunit, ...
        Distance: -90; Region: promoter
    Flanking Genome Sequence: GT14014 - 5-prime edge 
    CCTACTTTCT CCCTGAGCCG ATATGTCTGT CAGTGAAGTA GTGAACAAAT 
    AGTTGTTCTT TATATTTTCT TATTACTTTT CATAAATAAC AAAATAGCCC 
    TTTACTTATT TTCGTATATT TAAATAAACC CCAATAGATA TATATTTATA 
    CTAAAACCTC CCCGCGTTAA TTAATTATGA GAAAAGCTTG GTAAAAACCC 
    TATTTTTCTT CTTCTCTTCA ATTTACAGTT CTCTGCACCT TTTACTTTCC 
    CCTGTTTTTT GATCCTCAAT CACCAAACCC TAGCTTGTTC TTCTGTTGAT 
    TATTTCGAAA AGGGGGTTTG TTTGTTTTCT GGGAATCAGC AAAAATCACG 
    AAATGGTTGG CTTAATATTT CAATCGGGAT AAAATCGATC GAAAATGAGT 
    CAGCCTTCTG TGATTCTTGC TACGGCTAGC TATGATCACA CCATCCGATT 
    CTGGGAAGCC GAAACTGGTC GCTGTTACCG TACCATTCAG TATCCTGATT 
    CGGTTTGTTT CTCTCTCTC

AT3G18140.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G22040.1); Has 76534 Blast hits to 29814 proteins in 808 species: Archae - 88; Bacteria - 10199; Metazoa - 30987; Fungi - 16399; Plants - 9158; Viruses - 0; Other Eukaryotes - 9703 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G18140.2

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G22040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G18145.1

Model type
Pseudogene
Computational Description
pseudogene, similar to putative carbamoyl phosphate synthase small subunit, blastp match of 89% identity and 4.4e-115 P-value to GP|21535793|emb|CAC85725.1||AJ319873 putative carbamoyl phosphate synthase small subunit {Nicotiana tabacum}
Link
InterPro Scan - TAIR