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GT14022

CSHL Arabidopsis genetrap mutant lines

Original: GT14022

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14022

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2754458 [Map]; Strand: w
      • AT3G09020.1 - [+] show detail - alpha 1,4-glycosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G09030.1 - [+] show detail - BTB/POZ domain-containing protein
        Distance: -324; Region: promoter
    Flanking Genome Sequence: GT14022 - 3-prime edge
    AGAGGTTTTT ACCGACCGTT ACCGACCGTT TTCATCCCTG TTCAATTTCG 
    AATTTTCTGC TAAACTTATT CCACAAATGC AATCCATAGC TTCTCTTCTG
    CATTTCAAGA ACCTTGACTT GAACTCTCTT TGAATCTTTC TCTGTTCTTG
    GAACCTTGAA TAGCTTCTCA ATCTCAACCC AATTCACTGG ATAAAACGCA
    GGAGGTGTCA AGATGGTGAA GTTATAGCCA TCGGTTCCTT CCACGGCTCG
    AGCCACTCGT GAAACAAGAT ACGGTCCGTT ATGTCCCCAA ACGTTTCCAT
    TAAAAGTCAA CGCAAATTCT TCAATGGATT TGAGCAAGAA TGGATGATTC
    TTGTCGAAGA TCAATACCGC ATTGTTCAAT CTTGTCCAGT TTCTCGAAAC
    CGGCTCCAGA GTCTGCGCAC CGATCACGTT CCTTAGAGTT TTAAAGCTCT
    TTAAAACAAT CATGTCTGTG TCTAGATAAA CACCTCCGAA TTTGAACAAA
    TAAGCAAGTC TCATGAGGTT TGATAGATTC TGAGCTAGAG AGATCTTTCC
    TGGATCTCTT TTACCGGTCT GAATCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2754527 [Map]; Strand: w
      • AT3G09020.1 - [+] show detail - alpha 1,4-glycosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G09030.1 - [+] show detail - BTB/POZ domain-containing protein
        Distance: -255; Region: promoter
    Flanking Genome Sequence: GT14022 - 5-prime edge
    CCTACTTTCT CCCTGCAAGG AAGTGCCATG GATAAATTGG TTTCAAATCA 
    ATGTATAATT TGTGACAGTG TTGTATCTGT ATCATGACTT TTCTTTTTTC
    ATTTTGTAAT TCCATTGTAG AATAGCTTGT AAATTGTAAT TAACAATGAA
    ACCCTCAGTT TTTTTCATTT CTTTCAATTT AAACCCTGAT TAAAATCAAT
    CTCTCTATAA AGCTCCTATC AGGATGGTTC TGGCTTTTTA TGTTTGGGCT
    GATAATTATC CTATAGAGAT TAGCACAGGC CCATATAAGT TGACAAGTCA
    TCAGTTACAA TTACGTTTCT TCTTCACACA GCCCAATTAG CAAAAACTCG
    GTTCAAGCTG AAATCGAAAC TCGAACCGGA CTGTGATGGT GGTTTCCGAT
    GGCGGCAAAC GAGTGAAGCT CAACGTCGGC GGCGAGATCT TCGAAACCAA
    CGCGTCGACC ATTCAATCAT CTTGCCCAGA CTCTCTCCTC GCAGCTCTAT
    CGACTTCAAC CTCCCATGGA TCGAATCCG

AT3G09020.1

Model type
Protein coding
Short Description
alpha 1,4-glycosyltransferase family protein
Computational Description
alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 364 Blast hits to 360 proteins in 67 species: Archae - 2; Bacteria - 16; Metazoa - 234; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09030.1

Model type
Protein coding
Short Description
BTB/POZ domain-containing protein
Computational Description
BTB/POZ domain-containing protein; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain with WD40/YVTN repeat-like protein (TAIR:AT5G41330.1); Has 1593 Blast hits to 1581 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 1335; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).
Link
InterPro Scan - TAIR