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GT14032

CSHL Arabidopsis genetrap mutant lines

Original: GT14032

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14032

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30394278 [Map]; Strand: c
      • AT1G80870.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT14032 - 3-prime edge 
    CCGACCGTTT TCATCCCTAG ATCTGAGCTT TTCATTTTCG AAATTGTTGG 
    ATGTAACTTG AAAGAGTTTT AGCTTTTGAG AATTGTATTA TGTTGTAATT 
    TTTGTAAACT ATATATATAA TTTAAACTCT TATATATAAA TATTTAAACT 
    TTTAAACTTT TTCGATTGAT TAAATAATTT TAGATAAATT GTCTTGTTTT 
    CTTAACTATA CCTAATATAT TTGTTTTTTA AATGTTAAAT TTTAAATATG 
    TGTAAACTAA TTGGACACAT CCATTGTCCA ATTATGTTTA TTTAGAATTT 
    TAACACCTAT TTCATTTATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30394195 [Map]; Strand: c
      • AT1G80870.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14032 - 5-prime edge 
    CCTACTTTCT CCCTGCTCAG ATAAACCTCG AACTACTACT CTGCATTGCC 
    CTGTTTTAGC TTCTCCGCTT CGATCTACTG CCGTAAACTT TTCCCGGTGG 
    CGAAGGAGAA AACTCGAAAG CAGTGGAGGA AATGTCCATT TCCCCTCTCA 
    AGATTCTCAC AACTTCACTA ACATCAGGCC GTAACTCTGG AGCTTTCTGC 
    AGACAAGCCA AAGCCAAGTT AATGCACAAT CCTGCTTCTT CCTTGTTATA 
    CCCATCCTTC ATNTTCTCGG CGAACAGCTC AAGAACGTTC CCTGACTGAG 
    CCAGTTGCCT ACACCAGCTC ACCAAATTTG CTTTTTCAAG CTTCATCGGC 
    GATGCAAGGA CGTGTAAAGG CCTCCTACCC GAGACTATCA CTAGAATCAG 
    TACTCCAAAG CTGTAGATAT CTCCTTTCTC CATCAAGTAA CAGCAACCGC 
    CTCCATATTC CGGTGCTATG TAACACAATG TTCCTCTCAT ACTCGGCGTG 
    CTGCTTAATT CACGGCTGAA CAAATCACCA CTCCACATCT CACTCCACAT 
    CGATCCATTG GTGTTCTTCT TCTTCTTCTT GCTGCTGCTA TTGCTTTTCC 
    TTCTCCATCC TCTTT

AT1G80870.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G51770.1); Has 92712 Blast hits to 76168 proteins in 3269 species: Archae - 56; Bacteria - 7291; Metazoa - 26312; Fungi - 5337; Plants - 43631; Viruses - 173; Other Eukaryotes - 9912 (source: NCBI BLink).
Link
InterPro Scan - TAIR