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GT14051

CSHL Arabidopsis genetrap mutant lines

Original: GT14051

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14051

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6968050 [Map]; Strand: w
      • AT4G11470.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 31
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14051 - 3-prime edge
    ATATTTAACT TGCGGGACGG CTTGTCGGCG TTGTCACCTG TCCAGTAGAA 
    TGAGTCGGTC TGGTTCGGAC AGTTTTGTAA TAAACCTTGA GACGCGAGTT
    GGATACAATC GGAACACACC CTTGGATCAG ACCCTGGGAT ACAGAGACCT
    AAGGCATAGA TTCTTCCCCC TC
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 847490 [Map]; Strand: w
      • AT3G03540.1 - [+] show detail - non-specific phospholipase C5
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT14051 - 5-prime edge
    TGAGTTTTCT CAAATTCCTG AAAAACCAAA CACAAAAGAA TACTAATAAA 
    GATTAATATC GCAAAGCAAT ATATAATACT AAAATCTTTT GCAACTCGTA
    AAATATTAAG ATACCTATAA AAGAGAGTAG TAGGAAAACA TTGGTAATAA
    ATCCCAAAGG TAAAACCAGC TTCATCGAGT GACTCGAATA TCGTCTTTCG
    TGGAAAACCT TCGATCAGTA ATTTCCTCTC GTTGTTCGTT GTTCCGTGTG
    ATGTTGCCGA ATGTATAAAC AATCGGTTTG GCTGTGTTGC ACCCGGAACC
    GACGCAAACC ACCTGTCCAA TACATGAAAT TTGCTATAAA GCGGGATTTT
    GCTAGACAAC CAATTTCCAA TTCGGTTTTA GTTGGATGAA CCGAACCGTT
    ATACAGATGT AATTTATACA GGTCAAACGG TCTCACCTAT CACATATAGC
    GAAATTTTGA ACCAATTCCT TGTAAACCGG CAAAGCGTCC GGTTTAAATC
    CGTTCATAAC CGCAGAAGAC ATCCCTTTCA TCTCACTCGA

AT3G03540.1

Model type
Protein coding
Short Description
non-specific phospholipase C5
Curator Summary
Encodes a nonspecific phospholipase C. Located in the cytosol. Involved in the conversion of phospholipids to glycolipids under phosphate deprivation conditions.
Computational Description
non-specific phospholipase C5 (NPC5); CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C4 (TAIR:AT3G03530.1); Has 2077 Blast hits to 2037 proteins in 379 species: Archae - 32; Bacteria - 1720; Metazoa - 0; Fungi - 127; Plants - 154; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G11470.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 31
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 31 (CRK31); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 32 (TAIR:AT4G11480.1); Has 120832 Blast hits to 119169 proteins in 4439 species: Archae - 88; Bacteria - 13747; Metazoa - 44536; Fungi - 10306; Plants - 33929; Viruses - 433; Other Eukaryotes - 17793 (source: NCBI BLink).
Link
InterPro Scan - TAIR