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GT14109

CSHL Arabidopsis genetrap mutant lines

Original: GT14109

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14109

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT14109 - 3-prime edge 
    ATTTTGTTTA AGGTTTAATT TTTTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24470082 [Map]; Strand: c
      • AT1G65790.1 - [+] show detail - receptor kinase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14109 - 3-prime edge 
    CCGACCGTTA CCGACCGTTT TCATCCCTAT CTAGAAGATT GTAATTGCAC 
    TGCGTTCGCT AATGCGGATA TTCGCAATGG CGGGTCTGGT TGTGTGATTT 
    GGACCAGAGA GATTTTGGAT ATGCGAAATT ATGCTAAGGG AGGTCAGGAT 
    CTTTACGTTA GACTAGCCGC TGCTGAACTC GGTTAGTTTC TTTCTTATTT 
    GCAGTGGTTT TTATTTTTTT GTTTTGATTA AAAAGTTATG AGCCAAAGTC 
    CAGATATCTT CCCAATCTGC GGACTAAGTC ATGTAATATT GTCCCTTTCC 
    AAGCAAAGTT CAAACTCCCT ATATCAAAAT CTATAGAGGC TTTGGTCAAC 
    AAAGTACATT CTTGATGCTT GGTCAATTTG TTTAGGTTTA TTTTTTTACT 
    TTTTTGTCAT CTGTTTTTAA TTAGAGCTCA AAAGAGTTAA ACCTGATATA 
    TATTGTTTAC ATAAATGATA TAAAGCGGTT TAATACAAAC TAAATATCAA 
    ACTAGAGGGG AAAGTTGAAT ATCGGTAAGA TGTATAATGA CAATGTAGTG 
    GAGTTTTGGC AATAATCTAA GAGAAAAACA TTTTTATACA AAACATTTTG 
    GATAATGTAT ATTTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24469985 [Map]; Strand: c
      • AT1G65790.1 - [+] show detail - receptor kinase 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14109 - 5-prime edge 
    CCTCTCTTTA CAGACTTTCA ACCCAATATC TCTGTCCACA CCTTTCGCCG 
    TGGTATCTGG CAATTTCATC CTCTTCAACC GGGTAAAACC ATCTCTACCG 
    TCACAGCTCA GCCTCGTCTT CCTCATGCAA CCAGCGGAAC CATCTCTCAA 
    GTCCCACGCT TGCTCATTCA CTGGCTTAAA CCCTTTGATA CAATAACAAT 
    TTGGTAAACT GTTCGAGTCG CAATAACCGA AATTCCCGCA CACTTTATAG 
    TTATCGCATA GGTCCTTCGG TGAGTACCAT AGTTGCTTCC AACTCTGTGT 
    TGTCTCAAAC CAAGTCAATC GTTGTAATAA ACCCGCAGAG TTTAAGTATA 
    ATCTCGAGTA TAAGTTCGTT TTGTTGATTC GGTATGAGTA AGTCACTTCC 
    TCCTTACTTG CTGTGAAATT GTAAACCATG TAATCAACTT GATTTATCCC 
    TGGTACGCTG CTAAAACGCA TTCCATTCCA TGGACCGCTG CGGGATAGTA 
    TCGACTCCTT GCTGCATATG TAAAACTC

AT1G65790.1

Model type
Protein coding
Short Description
receptor kinase 1
Curator Summary
An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain.
Computational Description
receptor kinase 1 (RK1); CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 122289 Blast hits to 120537 proteins in 4566 species: Archae - 105; Bacteria - 13863; Metazoa - 44387; Fungi - 10421; Plants - 35006; Viruses - 434; Other Eukaryotes - 18073 (source: NCBI BLink).
Link
InterPro Scan - TAIR