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GT14111

CSHL Arabidopsis genetrap mutant lines

Original: GT14111

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14111

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14728829 [Map]; Strand: w
      • AT2G34920.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT14111 - 5-prime edge 
    TAAAAATGTG TGATCTCATT TCGCTTATAA TCTCCATCTC CTGAAACATT 
    TTAATGAAAT ATAAATGCCA ATCTCTCACC AAAACTGATG GTGACATTTC 
    ACCAAGAAAA GAAGAGGCTC ACAGTG

AT2G34920.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
embryo sac development arrest 18 (EDA18); FUNCTIONS IN: zinc ion binding; INVOLVED IN: embryo sac development, pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G30860.1); Has 2267 Blast hits to 2247 proteins in 225 species: Archae - 3; Bacteria - 29; Metazoa - 1450; Fungi - 60; Plants - 428; Viruses - 44; Other Eukaryotes - 253 (source: NCBI BLink).
Link
InterPro Scan - TAIR