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GT14121

CSHL Arabidopsis genetrap mutant lines

Original: GT14121

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14121

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100902 [Map]; Strand: w
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14121 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTACTG ACTGTCAGAG GCTGCGTTGT 
    CGGAGTAGCG GTACGAGAAG AGGCGATTTA GGTTGAGCTG GTCGGCGAGG 
    ACGCTGAGGT TTGAAGTAAC AACAACAACG GGGGCAGAAG AAGGGAAGAG 
    GAGAAGAGAC CGGACGTGTC TGAAGAAAGT TGCGAGGAGA GCCAGTAGCA 
    TCAGTGGGAT CGAATCTGAT GACACGTCGG AGAGCTGACC TTGTAGTCCC 
    ATTGATATGG TTTTAGAGAT TGTTTTTGTT TCTTTGGTTC TTGTTGTTGT 
    TCTTGCTGCA TATACTACCT TGCATCTCAT CTCTTTCTTC TTCTTTATAT 
    GGATGGAGAA GAAGAAGAAA TGACACAGGC CACGTGTTGT GGGACCCATT 
    ATTTTGCTTT TTGTTAAGCC CTTTCACTTT CAGTCCTTTT CGTTTTTTCC 
    CATCTTCATA CTTTTCGCCC CGCTATTTGC ATTTTATGAT GAATATGACC 
    CAAAACATTT CACTTTTCTT TATTCTCACC CACATTTTCG GTTTATTGGA 
    AAGAGATACT AAAGTCAAAA TTGAATGACT CTAAAATGTT GTTGGATGCT 
    GATTTGATAT CTCTATCTAA GCCTCTTTCT ATCTCCAAAA GACCAAACAA 
    AATTTTGCAG AGGCCTTCAA TCATTGAGGC TTTAGAACC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1102999 [Map]; Strand: c
      • AT2G03620.1 - [+] show detail - magnesium transporter 3
        Distance: -231; Region: promoter
      • AT2G03620.2 - [+] show detail - magnesium transporter 3
        Distance: 0; Region: exon2 (5UTR)
      • AT2G03630.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -206; Region: promoter
      • AT2G03630.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -206; Region: promoter
    Flanking Genome Sequence: GT14121 - 5-prime edge 
    TTCTTTTTCT TGCTAGAGAG AATGAAGGAA GAAAGAAAAA AATTAAGATG 
    AGGAAAAGGG GATCTAGGGT TTGGTTCGTT GTCTGGAGAT AAACAGAACG 
    AAAGGTATCT CGTAAAGTTC GGAACTTTAA CTAACAAAAC CATGGCTGCA 
    TTTCGCGCCA TGTCTTCTTA TCTGTTCTGT TTTATAAATG ATCCTCTGTG 
    TTACGGTCTA TTTAAGAAAC CGTGTTCTAT CCAGTAAGAT AAACGCCTTG 
    ACTTTT

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03620.1

Model type
Protein coding
Short Description
magnesium transporter 3
Curator Summary
Transmembrane magnesium transporter. One of nine family members.
Computational Description
magnesium transporter 3 (MGT3); BEST Arabidopsis thaliana protein match is: magnesium transporter 2 (TAIR:AT1G16010.3); Has 780 Blast hits to 741 proteins in 158 species: Archae - 0; Bacteria - 6; Metazoa - 65; Fungi - 215; Plants - 401; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03620.2

Model type
Protein coding
Short Description
magnesium transporter 3
Curator Summary
Transmembrane magnesium transporter. One of nine family members.
Computational Description
magnesium transporter 3 (MGT3); BEST Arabidopsis thaliana protein match is: magnesium transporter 2 (TAIR:AT1G16010.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03630.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03630.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR