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GT14122

CSHL Arabidopsis genetrap mutant lines

Original: GT14122

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14122

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT14122 - 5-prime edge 
    AAAAAAAAAA AAAAAAAAAA AGGGGGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19821381 [Map]; Strand: c
      • AT1G53170.1 - [+] show detail - ethylene response factor 8
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT14122 - 5-prime edge 
    CACTTTCTCC CTGGGAGAAG TGTAGAAAAG CTCCAATATA ATTTTTAGCT 
    GCCGTGAAAA AAAAGTCGTT ATGTATATAT TATTATGAAA CCCTATTATA 
    AATCGACGTA ACATAAGAGG ATCTTAAGCT TTTTTTTTTT CTTAAGAATT 
    GGCCAGGGAA AGGCTCCTCC GAAAATTCGT ATTTGAAAAG ATAAGGTTTT 
    TTGGGGTTTT TGGGGGCCCG GGGGTAAAAA AAAAAAAAAA AAAGGGGAAG 
    GGTTTTTTTT AAAAGACAAA ATATGGGGGG GAGAACCCCC CCCCCCGGTT 
    GAAAAAAACA AGGGCCCAGG GGCCGGGAAA CCCCCCCCCA TTGGGGGGGG 
    GACGGGACCC TTTTTCTTGG GGGGGGGGGA ACTTAAAAAA AAAACTCCTT 
    ACCCCTAACG CCTTTTCCCC GGTTGGGACG GCTTTCCAAA CTTTGGACTT 
    TGGGGTTTGG CACCACCCCT TTAACCCCCA AGGATTTATA ACCAGAGGGT 
    AAAAAGCCTG GCTAAATTGA AAAGGATTCC GATTTGAAAG GGAAAAAAGG 
    TTTAAGGGAA TTGGAAAAAA AAAAAAGGGG GGGTTTCATA TGGGGGGACA 
    AGGGGGGGGG GAGATTGGAT TT

AT1G53170.1

Model type
Protein coding
Short Description
ethylene response factor 8
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
Computational Description
ethylene response factor 8 (ERF8); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5970 Blast hits to 5718 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5959; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR