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Mutant Lines
GT14135

GT14135

CSHL Arabidopsis genetrap mutant lines

Original: GT14135

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14135

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 75801 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -412; Region: promoter
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -423; Region: promoter
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: intron1 (CDS)
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: GT14135 - 3-prime edge
```
AGTGGGGAGG GAGGATGAGT AGAGTAGAGT AAAGAGCATC AAAAGAGTTG 
AAAATGTAAT CCATAGAATA TACCTGATT
```
3 prime edge [+] show sequence
1. Chromosome: 2; Position: 75888 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -499; Region: promoter
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -510; Region: promoter
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon2 (CDS)
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: GT14135 - 3-prime edge
```
GGTAGAGGTT TTTACCGACC GTTACCGACC GTTTTCATCC CTACTTACCG 
GTAATTGTCC TCCAGAGAGT GATGTTCTCA AACCTGCAGT GAGGAGGGAG 
GATGAGTAGA GTAGAGTAAA GAGCATCAAA AGAGTTGAAA ATGTAATCCA 
TAGAATATAC CTGATTAAAG ATCGGGAAGA GGCGAAGATG CCCTCGCTGC 
CACCGTAGAG GAGGAGAGAA TTACCGACAT CGTGGAAGGG CTGGGAAGAG 
TAGATGTGGG CGGAGGCCCC AGCGATTCTA AAGTGTAATG ATAGAAGAAA 
TGGGCACAGC AGCGCAGACA GCTGGATCAG TTTTCCCAAA TCCATTATCG 
GGGAACGAGG ATCTCTGAGG CTAACTAACA GGAAGGAAGC GGGAGAAGAG 
CAGCTGCCGA GTCCCTCTTG TTCTAACTGC TGCTGACTTT GGGGGACCAA 
CCAACTTAAT ATAATGGGTT GGGGCTT
```
5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT14135 - 5-prime edge
```
AAAGGAAAAA CGCTCGTCTG CTAAGATGGC
```
5 prime edge [+] show sequence
1. Chromosome: 2; Position: 75939 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -550; Region: promoter
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -561; Region: promoter
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon2 (CDS)
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: GT14135 - 5-prime edge
```
TTTCCATCCT ACTTTCTCCC TGCCGGTAAG GGCCACCGCA GCAATGGGTT 
AGTTCAAGCA GTGATCTTTG AAGCCTCCGA TCGTAACAAT ATCGGTGGTT 
CAGCTTACGG AGGCCAAAGA TCTATTTGCT GCACTCCAGA TCTGGCCAAG 
CTTCAAGGCT GTAAGCAGGG TGAGATCATT AGGATTCCTT CTCCACATGA 
CCCTCAATGG CCTATCCTCT TACCTGTCCG CTTTAAAGGA AAACGCTCGT 
CTGCTAAGAT GGCAGACACT GAGATTCTTA TCACCAAGAC TGGAATCTAT 
AATCTCTTAT TC
```

AT2G01060.1

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01060.2

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.1

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.2

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR