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GT14138

CSHL Arabidopsis genetrap mutant lines

Original: GT14138

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14138

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18018554 [Map]; Strand: c
      • AT4G38520.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -248; Region: promoter
      • AT4G38520.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -281; Region: promoter
    Flanking Genome Sequence: GT14138 - 3-prime edge 
    TTCCCTCTCG TCCTTTTTTG CCTCATTAGA TGGACAACAC CAAACAGTGG 
    CAAAGAATAA TATTACAGTT TTTTTAGGGA AGAAAAAAAA TAGTTGATAT 
    TATTGATATA ATAATTCATT CAGGTCTCCT CTTTATTTAA AAAATATTCA 
    ACTCTTTTAC TTTAGACATT ATCATAGACT GGGGTCAAAC GGAAGATTTT 
    TCTTCAACGT TTAATAAATT CTCTTAAGAC AAATCAAAGA AGAGTAAAAA 
    TATACGGTTT CGATAAAATT TGGTTAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18018367 [Map]; Strand: c
      • AT4G38520.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -61; Region: promoter
      • AT4G38520.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -94; Region: promoter
    Flanking Genome Sequence: GT14138 - 5-prime edge 
    GGGTCTTGGT CTGGTAAGAT CACTCTTAGT CTTAAGACTA TAGAGAGAGA 
    TAAAGAGAGA AGATAAAAAA AACAACTCCA ACTTTCTTTC TTTTTTTTAC 
    ATAAAAACGT CAAAGGAGGA TGTCTCGTTC GGCGACTTGA CCTCTCTCTC 
    TCTCTCTCTT TTACCTTCAT TGTTCACTGT TTCCAGACAT TGAAAGAAAG 
    ATCATTAGTT TCTGAGGGGA TAACCATTTT TTTTTCTTCT TAAAAAAGTT 
    TTTTTTTTGG AAAGGGGTTT TTTTTTCTTT TTTTTTTTCC CAAACCGGTT 
    GGTTTATTTT AATT

AT4G38520.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 5534 Blast hits to 5531 proteins in 297 species: Archae - 0; Bacteria - 21; Metazoa - 1498; Fungi - 573; Plants - 2468; Viruses - 5; Other Eukaryotes - 969 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38520.2

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR