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GT14158

CSHL Arabidopsis genetrap mutant lines

Original: GT14158

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14158

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22976441 [Map]; Strand: c
      • AT5G56820.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14158 - 3-prime edge 
    CCTACAGTGA TGATTTGCTT TTACGAATAC TCTCATTCAT TCATACAGGC 
    GATGCTATCT CCACAAGCTT ATTATCTAAA CGATGGAAGT TTGTGTGGAA 
    GATGATGCCA ACACTTGATC TTGATGAAGA TTCTTGTCGC AATATTGGCA 
    CCCTTCGATT TGACGAAGGT TGTTGCATGT TCTTGAAATC ACATGAAGCT 
    CCGGTTCTTA CAAGTTTGAA TCTCAAACTT ATGACACCTT CTCATGATAT 
    AGATCGTCTT TTATCAAATA T

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21237656 [Map]; Strand: w
      • AT3G57400.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-ter...
        Distance: -777; Region: promoter
    Flanking Genome Sequence: GT14158 - 5-prime edge 
    TCCTACTTTC TCCCTGATGA TAAACCATGA TATTGGTAAC CAATAAATAC 
    TAGTACATGT AATCGAGCTT CATAAATCAG AATACGTAAT GAAACTTAAC 
    CAGTCAATGT AATTATTTAC ATACAGGAAA AGTAGACTGA GAACGGTCAA 
    ACTTTGTTTT CTAAAAAAGA AAATTAGGCA CATCCTTGAA CCACGTTTGA 
    CAAAATCTCT GGTTTAATTA CACATTAACA CACAAGTACT CACTCTCTCT 
    TTAAAAGGCT CTATACACTG AATTTAATAA GGAAGGTTCT CACTTCTCAT 
    CAATATGAAT TTATCATTTC TTATATACTT TGCACTTTGC GCAATAAACA 
    TGTGATCCTA TTCATAACTA AAGTAAAGGC AACATACTAA CCCTCTTTAT 
    TTACCTTTTT TTTTTT

AT3G57400.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52500.1); Has 38 Blast hits to 38 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G56820.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR