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GT14163

CSHL Arabidopsis genetrap mutant lines

Original: GT14163

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14163

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 700344 [Map]; Strand: c
      • AT3G03080.1 - [+] show detail - Zinc-binding dehydrogenase family protein
        Distance: -43; Region: promoter
    Flanking Genome Sequence: GT14163 - 5-prime edge
    CCATCCTACT TTCTCCCTGG CCGTTTGTGG CTATCATCGT ACGATTCACA 
    AAAGCCTATA AATACAATCA CGTCCTCAAC GTAGGAGGAA CACAAAAATC
    ATCTTTTGTG GCAAAGGAAC CTAAACCGGA GAGAAAAATG GCAACCTCAA
    GCAACGCGAC GGTGGCCAAT AAGCAGGTCA TACTGCGAGA TTACGTCACC
    GGTTTCCCCA AGGAATCAGA CCTCATCTTC ACCGATTCCA CCATCGATTT
    AAAGATTCCG GAGGGATCCA AGACGGTTCT GGTGAAGAAT CTCTACTTGT
    CTTGCGATCC TTACATGCGC ATTCGCATGG GGAAGCCCGA TCCCGGCACT
    GCTGCGCTCG CTCCACATTA CATTCCCCGC GAGGGACAAA AACGACGTTC
    ATCGTTTTAG GCATGTTCTG GATTGTTACG TTTCGAGGTT GGTTGTTACC
    CAGGGTTTTG GAAACATTTT

AT3G03080.1

Model type
Protein coding
Short Description
Zinc-binding dehydrogenase family protein
Computational Description
Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 15825 Blast hits to 15807 proteins in 1776 species: Archae - 145; Bacteria - 8757; Metazoa - 820; Fungi - 1154; Plants - 597; Viruses - 0; Other Eukaryotes - 4352 (source: NCBI BLink).
Link
InterPro Scan - TAIR