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GT14173

CSHL Arabidopsis genetrap mutant lines

Original: GT14173

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14173

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14637757 [Map]; Strand: w
      • AT2G34700.1 - [+] show detail - Pollen Ole e 1 allergen and extensin family protein
        Distance: -2130; Region: intergenic
      • AT2G34710.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 1566; Region: intergenic
    Flanking Genome Sequence: GT14173 - 5-prime edge 
    CAAGAAAGTG CCGTAAAATG TAAAACTTCC AATGTTCCTT AGTGAAAAAT 
    GTTAACTTTT CTGTTGACAA GACGTGTATA TAAACATCAC CTATACCGGA 
    GAAGAAGAAG ACACAAAACA AAGTTAAAAA GAAGAAATTT TTGGTGCAGT 
    GAATTCGAAG AGCAATATGA AGAATATTGG TTACATTATT ATAGCCACCG 
    TGCTTGTTGG TCTCCTCCTC ATCTGATTAA ATATCATTTA AAATGGAACG 
    GAAGAGTAGT TTAGATATTA TAGTTTCCAC TTCTGATTTT TGTTATTATA 
    TATTTTATAG ATAAACAAAC TATTCAAGTC AATAACATAC TATTGCTTAA 
    TAATGCTCCT TCATATATAG TAATACTATT GTCAATGGAT TGTGCAAGCC 
    AAAGACATGA CCTCAAAGTT TTCTTATGGT GATAGAGCCA TGGAGGGAAG 
    AGGCTACAAA GTTGATGTTG CCTTATGTAA TATACCATCA TCAGTGGTTT 
    TTCCAAAATC CAGAAACTTG GTGGTGCCTT CAAAAGTTCT AGTGAAATGG 
    GAAGGAAATG TATTGTTCCC GATGCATATA CACGGGAAGA AACAAAATTA 
    TGAGAAGAAA CAAAATTATG ATTAAATGTT TAGTACAATA ATATTAATTA 
    TTAAAGCAGT ATCGTTTT

AT2G34700.1

Model type
Protein coding
Short Description
Pollen Ole e 1 allergen and extensin family protein
Computational Description
Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 31 (TAIR:AT1G28290.1); Has 194 Blast hits to 194 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G34710.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA.
Computational Description
PHABULOSA (PHB); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT1G30490.1); Has 3393 Blast hits to 3288 proteins in 275 species: Archae - 0; Bacteria - 20; Metazoa - 905; Fungi - 114; Plants - 2320; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR