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GT14174

CSHL Arabidopsis genetrap mutant lines

Original: GT14174

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14174

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9436824 [Map]; Strand: c
      • AT1G27170.2 - [+] show detail - transmembrane receptors;ATP binding
        Distance: 0; Region: exon3 (CDS)
      • AT1G27170.1 - [+] show detail - transmembrane receptors;ATP binding
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT14174 - 5-prime edge 
    TTGAGAAAAC GTTCACGGAA GTGTTCGTTT TCTGCGATGT GGACGGACAC 
    GGGATATACG TTGCCGAGCA AGAAAATCCG GAGGGAGATT TTCTAACGGG 
    GAACCTTTCC ACTGAATCCC CTTGAGTTCA GATGGGAGAA GTCTAAGATT 
    TCCTTCCAGT TCCGCATTAT TAA

AT1G27170.1

Model type
Protein coding
Short Description
transmembrane receptors;ATP binding
Computational Description
transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G27170.2

Model type
Protein coding
Short Description
transmembrane receptors;ATP binding
Computational Description
transmembrane receptors;ATP binding; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT1G27180.1); Has 88149 Blast hits to 36022 proteins in 1268 species: Archae - 44; Bacteria - 5525; Metazoa - 17765; Fungi - 1406; Plants - 58458; Viruses - 8; Other Eukaryotes - 4943 (source: NCBI BLink).
Link
InterPro Scan - TAIR