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GT14175

CSHL Arabidopsis genetrap mutant lines

Original: GT14175

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14175

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 833525 [Map]; Strand: c
      • AT3G03500.1 - [+] show detail - TatD related DNase
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: GT14175 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGTTGT 
    AATGAAACCC CTTTTGGCTG ACATCTCATT AGATTAACAT CTTCATAAAA 
    TTTAATGTGT GTTTTGCAGA TTGGTTTAGA CAAAGGTCCC TTAGCAGGAG 
    GAATTGATTA CTCAGACCAG CTAGTCGTGT TTCGCCCACA GCTTGAACTT 
    GCAAAAGAAC TGAACAAACC AGTAGCAGTT CATTGCATCG ATGCATTTGA 
    TGATCTCCTA GAGATAATGA GGTATGTATA TCTACATGTT GCATTTACAA 
    AGATATAGCA CTAAGTTTCT CAAAATAAAT ACACGCAGAT CCATAGGGCC 
    TTTTCCTGCT GGGGTGATTC TTCATTCATT CAATGGTTCA GCTGAAGTTG 
    TTCCTAAACT CGCTGAGCTT GGTGCATACT TCTCTTTTTC TGGCTGGTTC 
    ACTTACATTG ATGAGAAAAT TGCCAGGAAG ACTTTGAAAT CGGTTTGCTT 
    TTTTCCTCTG TAATTATAAA AAATTCTGGA AAACGAATGT ATTGAATTCT 
    TTTTACCTGG TCTGGTAAAG ATTCCTTCCG ATAGGCTCTT ATTGGAGACG 
    GATTCACCTG ACGGGTTACC AAAATCAGAT GAGAGTTCTT CGGATCCAAA 
    ACCAACTCTC AATGAGCCTG CAACATTCTT GC

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT14175 - 5-prime edge 
    GTTTAGAAGA ATAAGTGATA AAGACACAAA CTTC

AT3G03500.1

Model type
Protein coding
Short Description
TatD related DNase
Computational Description
TatD related DNase; FUNCTIONS IN: endodeoxyribonuclease activity, producing 5'-phosphomonoesters, deoxyribonuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Deoxyribonuclease, TatD Mg-dependent (InterPro:IPR012278), Deoxyribonuclease, TatD (InterPro:IPR015992), Deoxyribonuclease, TatD-related, conserved site (InterPro:IPR018228), Deoxyribonuclease, TatD-related (InterPro:IPR001130); BEST Arabidopsis thaliana protein match is: TatD related DNase (TAIR:AT5G17570.1); Has 10176 Blast hits to 10176 proteins in 2674 species: Archae - 185; Bacteria - 6995; Metazoa - 308; Fungi - 266; Plants - 100; Viruses - 0; Other Eukaryotes - 2322 (source: NCBI BLink).
Link
InterPro Scan - TAIR