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GT14176

CSHL Arabidopsis genetrap mutant lines

Original: GT14176

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14176

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4007570 [Map]; Strand: w
      • AT3G12610.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14176 - 3-prime edge 
    TAGAGGTATT TTACCCAACG GGACCGAACC GTTTCATCCC TATCTACAAT 
    CCTGATTCGG GTCGGGTCAC TGATATTTCT CTCCGGGGAG AATCTGAAGA 
    CGCCATTTTC CAAAAGGCAG GCCGGTCCGG TTATATGTCC GGTTCGATTG 
    ATCCAGCAGT TTGTGACTTA ACCGCACTCA CTTCCCTCGT TCTCGCCGAC 
    TGGAAAGGAA TCACCGGAGA GATTCCTCCG TGCATTACTT CCCTAGCTTC 
    GCTCCGTATC CTCGATCTCG CCGGCAACAA GATCACCGGG GAGATTCCCG 
    CGGAAATCGG CAAACTCTCG AAACTCGCTG TTTTAAACCT CGCCGAGAAT 
    CAAATGTCCG GCGAGATTCC GGCGTCACTG ACGTCACTCA TCGAGTTGAA 
    GCATCTTGAA TTGACGGAAA ATGGAATCAC CGGCGTGATC CCGGCCGATT 
    TCGGATCGTT GAAGATGTTG AGCACAGTTT TACTGGGCCG TAACGAACTA

AT3G12610.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes.
Computational Description
DNA-DAMAGE REPAIR/TOLERATION 100 (DRT100); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G20820.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink).
Link
InterPro Scan - TAIR