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Mutant Lines
GT14193

GT14193

CSHL Arabidopsis genetrap mutant lines

Original: GT14193

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14193

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 11208047 [Map]; Strand: w
- AT4G20940.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
  Distance: 1767; Region: intergenic
- AT4G20960.1 - [+] show detail - Cytidine/deoxycytidylate deaminase family protein
  Distance: -3899; Region: intergenic

GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTCATC 
TTAAATGACG CACCGATAAA GTTGTACTCG CCGATCTCAA TCCTTAAACG 
AAACGCACGA ATAACGAAGC AACGTTCTAT GATCTCAGCC GTCGACGCCC 
GTGGTCTCAT CATGCACTAC GACCTGAGCA ATGATTCGTT CCCCGACTCG 
ACCTTCTTGG CCATCTCGTA CATCTGCGTG ATCGTCATCT TCCTTGCTAC 
TCTGAAGCAA AGCAGAGTAA CAAAGTTCAA ACCTGAGCTC GGCAAACAGA 
GTTTAAACGC CAAATCCTCC GACCATGAGA TCACGAATAT TAAAGGATGT 
CACCTCAGCC TTCAACAATT CAACGTTCGC ATCCAATCTT GACATCATCT 
CGTTCGACTT TATCTTCA

5 prime edge [+] show sequence

Chromosome: 4; Position: 11208109 [Map]; Strand: w
- AT4G20940.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
  Distance: 1829; Region: intergenic
- AT4G20960.1 - [+] show detail - Cytidine/deoxycytidylate deaminase family protein
  Distance: -3837; Region: intergenic

CTTTCTCCCT GAAATGAGCG CATGATCGAT CTTCTGCTGT GATTCAAATG 
TGCAAGTGCA ATCGTAGGCA GCTTTAGTTC GTCGAAATGG TGTAAGCGTC 
GAGCTTGTAC GGTGAATTCT TCGGAGGTAA CGGCGTTGAG ATGATTTGTA 
TAGCGATTAC GGAGGTGTAG GTTTGACATA CATATATATA TGTATATATA 
TATATACCCA CCCTTTTTTT TTAAAAAAAA AAGGCGGGGG GGAACCTGGG 
GGGGTTTTTG AAAATTTTTG CCAAACCAAA AGGGGGGTGG GGGGGCAAAC 
CTTAAACCGG GCAAGGGGGG GCCCCGGCCC TCTTGGCAAT GGAGGCCCCT 
TTTTAAAACA AAAGAAAAGG GTTCCGTTTC AAACCTTTAG GGAGTTTTTG 
TTTTCCCGGA AAATTCATTT GGGGGAAAGC CCCCGTTTCG GGGGAAACCA 
AAAAAAAGAA TTCCACCCCC AAACTTTGGG GATTTTTTAA AAAAACCAAA 
GTTTCGCAAA ACTTTTGGTT CCCACCAAAG GGGGCCGGGG AAGAACCCGG 
TTTAAATGGG CCCCCCAAAA AACCAAAGGT GGCCAAACTT TTGATTCCCT 
CCAAACCGGG GGGGGGGG

AT4G20940.1

Model type: Protein coding
Short Description: Leucine-rich receptor-like protein kinase family protein
Computational Description: Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: signal transduction, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 124696 Blast hits to 48167 proteins in 1508 species: Archae - 53; Bacteria - 7002; Metazoa - 34401; Fungi - 1693; Plants - 72944; Viruses - 23; Other Eukaryotes - 8580 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20960.1

Model type: Protein coding
Short Description: Cytidine/deoxycytidylate deaminase family protein
Curator Summary: encodes diaminohydroxyphosphoribosylaminopyrimidine deaminase catalyzing the second step in the riboflavin biosynthesis
Computational Description: Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, diaminohydroxyphosphoribosylaminopyrimidine deaminase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: cytidine/deoxycytidylate deaminase family protein (TAIR:AT3G47390.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR