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GT14200

CSHL Arabidopsis genetrap mutant lines

Original: GT14200

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14200

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 63832 [Map]; Strand: w
      • AT5G01180.1 - [+] show detail - peptide transporter 5
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT14200 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATTCCTCA 
    GCCGTGTAGT TCATATCACT CGACAAAACT CTGTCGTCGC TTCCCCGAGA
    AAAGGTAAAC GAATCTTTCA CCAACGATTA ACCGTTTCTA AATATTAAAT
    CTGGTTATCT TTGATCTGTC TTTTTTTTGG TTCTATGAAC AATTTCTGTT
    ACTAGTAATC ACACATTTTC GGGAGGAGTG TTCTTAGATT TATTTTCATT
    TTCAAACGAA ATTTGCGATT GTGTGTTTTC GATTTTTCAG ATCCGTAGCT
    TTCTTCGACG AAATTATATA TATGTATGTA TGGCTTCCGA TTTTGTCAGT
    TTGTGTCTAG AAAACGCGTT ATGTTTTTGT CATGATGCAT GTAATGGACA
    TTACTTTGGC TATTGCTCAT AAAATAAATC GATGTTTTTC AATTCTGTTT
    CTTCGTGGAG TCACACATAT ATATATATCG AGGCTTATCT GTCTAAATCC
    GATAATTAGT CGTAGAAATA TCGTTGTGTA GATTTTACTT GGCAAAGAAG
    TCATCTTTTG TCCTTTTTCT CAGAAAATCA GGTCAAAAAT TCTCACATTG
    TTGAAAACTC AGGGGTCACA CTTAAACTTG TCGAAACCAA ACAACAATGG
    AAGATGA

AT5G01180.1

Model type
Protein coding
Short Description
peptide transporter 5
Curator Summary
Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane.
Computational Description
peptide transporter 5 (PTR5); CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR