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GT14229

CSHL Arabidopsis genetrap mutant lines

Original: GT14229

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14229

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15191728 [Map]; Strand: w
      • AT4G31310.1 - [+] show detail - AIG2-like (avirulence induced gene) family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT14229 - 3-prime edge 
    ACGGTAGAGG TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAACAA 
    TAACACAAAA GAACAATGGC CTTAACGTTC CTCTATGGCT TGTCCTAGTG 
    TTTTCCATCC TTCTACATAC ATAGTACATA CAAAGAAACG AATGTGAAAA 
    AGGGAATCAG GGATGATTAA TGAACCTTTC CGTTGACTTT TCCGGTACCG 
    TCCGGTAGAA TTGTTGGATA GACACGGCCT TTGAGTCTAA ACCTGTGACT 
    GATATCCCAG AATCGCCGTT AATCAAAACA TCAATTGGAT CCAAAAACGA 
    ACGAAATCAA GACAGATAGA GTCAGAGATA AACGCACAAG CCGGAGAGTA 
    CGGCGGAGAC ATGGTCAGGG ACGCGATTAA GAAGCACGTA TACGACTTCG 
    GGTTCCTGGA GACTGCCATA GACAAAGAGA TCGTAAGCAG CTTTCCCTGA 
    CAACATACTC ATCCTTCTTT GGTCTCTCCT ACTCCGTCCA GTTCCTGCGA 
    CTGAGTAGAA GTTCAAGTGT CCCTTGTCCC GCCACGTGTC AAGCATATAA 
    AAGGTTGTGA TTACTATTTT GAACAATGTT TTTTCACCAT AAACTCTTGG 
    TCACTAAAGA AGAACTGAAA ATCAATTTCG GAGAAGATGG CTAACATTTC 
    TACTGGATCG ATTCGAGAAC AGAGGAATTA AAACCATAGC CATAAGAAAC 
    ACGATATCCG TTTAAAACAG AAAGATCGGG TCATTCATTA CAACAGAACC 
    TCAAACAGAG TTTAAAGTCT TAAAGACACT GGAAACTGTA ATGAAATATC 
    TAAAATGTTT GCCCAAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15191787 [Map]; Strand: w
      • AT4G31310.1 - [+] show detail - AIG2-like (avirulence induced gene) family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT14229 - 5-prime edge 
    CTTTCTCCCT GGTTATTGTG TAGAGACGAT TTTGTTGCCC TCCTTGTTTA 
    GTGTATACTG TTAATATTGA GATTTTTCAA AATTTTGAAG TACTGTGTTG 
    GTCTTGCAGG TGCTAAAGGG CATAACAGAT GATGAACTGA AGATGTTAGA 
    TGAGTTTGAA GATGTTGAAT ATGACAGAAA GACTGTTGAA GTAATGCTGA 
    CGGTAATTAC ATTTTTGACT GGAACAACTA ATTCTTACAT ATTGGATTAG 
    GTTTTATTAA GATAAGATTC TGATTAAAAC CTTTTGATGC TTTGTCATCT 
    GCAGGATACT TCAGAGAAGC TGCAAGTCGA AACATATGTA TGGAAGAACA 
    AAGATGATCC GGATCTTTAT GGAGAATGGG ATTTCGAGGT TTGTAATCTT 
    ATACCATATT CTAGCTTATT GTTTTTAGTC TGTGAAAGGT TCAAATCTTT 
    ATAAATGTTC ACACTGTGTT AGGAATGGAG ACAACATGAC AAGGAAGATT 
    TCGTAACAGC GACCAAGAAG TTTCTGGAAA ATAGGAGATT ACCAGAAGCA 
    AAGACGAGGA TGGACACATT CAAAACATTC TTTAAGCAGG ATCTTGAGAA 
    TGGGAAACCT CTGGACTCTT GATGATACTT GCACTTATAC TAGAGTGACT 
    GCTATTGCTT CACTTGAAAT AAGAC

AT4G31310.1

Model type
Protein coding
Short Description
AIG2-like (avirulence induced gene) family protein
Computational Description
AIG2-like (avirulence induced gene) family protein; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT2G24390.1); Has 337 Blast hits to 337 proteins in 100 species: Archae - 29; Bacteria - 60; Metazoa - 0; Fungi - 74; Plants - 104; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
Link
InterPro Scan - TAIR