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GT14244

CSHL Arabidopsis genetrap mutant lines

Original: GT14244

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14244

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22741687 [Map]; Strand: c
      • AT3G61460.1 - [+] show detail - brassinosteroid-responsive RING-H2
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT14244 - 5-prime edge
    CACTTTCTCC CTGTTCTGAT GTCATGATTT TCACTGTCCC GTGACCGAAT 
    TATTATAGAA GAAGCCACGC TTTTCTATCT TTTTCTGTGT CCCTTATGTT
    CTTTTTTGTC GAGAATTTCA CCCCTCTACT TTTGATGTTG CTTTTTTCAC
    CCCTCTTACT GACATTTAGA CTTGCCACGC TTTTATGTGT GTATATACTC
    CTTACATATG AATGAGAGAT GAGCAATAAA TATT

AT3G61460.1

Model type
Protein coding
Short Description
brassinosteroid-responsive RING-H2
Curator Summary
Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide.
Computational Description
brassinosteroid-responsive RING-H2 (BRH1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to brassinosteroid stimulus, response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G63840.1); Has 6755 Blast hits to 6739 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 1714; Fungi - 535; Plants - 3593; Viruses - 29; Other Eukaryotes - 884 (source: NCBI BLink).
Link
InterPro Scan - TAIR