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GT14247

CSHL Arabidopsis genetrap mutant lines

Original: GT14247

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14247

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT14247 - 5-prime edge
    CCTACTTTCA TCTCACTCGA CC
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1600820 [Map]; Strand: w
      • AT3G05520.1 - [+] show detail - Subunits of heterodimeric actin filament capping protein Capz superfamily
        Distance: 0; Region: intron8 (CDS)
      • AT3G05520.2 - [+] show detail - Subunits of heterodimeric actin filament capping protein Capz superfamily
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: GT14247 - 5-prime edge
    AGGCGCGATT GCCATACCCA ATATTATCAG GCACCATGAA ACAGAGTACC 
    TTGCATCTCT AGAGGTTCCC AATTAGCAAC TCATTTATCT CGTACTTTTC
    CATTTCATGT GTTGTTAATC TCGTTGTATC TGACCCAATC ATTAGGTAGC
    TTATTCAAAA TTACCGGATA ACACTTTCAA GGTAATTGTC TCTTTCCAAA
    TAACGATTTC AGTGGCTGCA CAATGGTAAC CTCAAGGTGT ATTTAAAAAT
    TTCTGAGCAG ATATATGGAA TTTTGCAGGA TTTGAGGAGG AAACTTCCGG
    TGACACGAAC TCTGTTCCCA TGGCAGAACA CTTTACAGTT CAGCCTAACA
    AGAGAGGTTG AGAA

AT3G05520.1

Model type
Protein coding
Short Description
Subunits of heterodimeric actin filament capping protein Capz superfamily
Computational Description
Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: nucleus, F-actin capping protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, alpha subunit, actin binding (InterPro:IPR018315), F-actin capping protein, alpha subunit (InterPro:IPR002189), F-actin capping protein, alpha subunit, conserved site (InterPro:IPR017865); Has 649 Blast hits to 643 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 391; Fungi - 148; Plants - 37; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G05520.2

Model type
Protein coding
Short Description
Subunits of heterodimeric actin filament capping protein Capz superfamily
Computational Description
Subunits of heterodimeric actin filament capping protein Capz superfamily; FUNCTIONS IN: actin binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: F-actin capping protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-actin capping protein, alpha subunit, actin binding (InterPro:IPR018315), F-actin capping protein, alpha subunit (InterPro:IPR002189), F-actin capping protein, alpha subunit, conserved site (InterPro:IPR017865); Has 69 Blast hits to 69 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 37; Fungi - 15; Plants - 8; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR