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GT14251

CSHL Arabidopsis genetrap mutant lines

Original: GT14251

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14251

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24657638 [Map]; Strand: w
      • AT1G66200.1 - [+] show detail - glutamine synthase clone F11
        Distance: 0; Region: exon1 (5UTR)
      • AT1G66200.2 - [+] show detail - glutamine synthase clone F11
        Distance: 0; Region: exon1 (5UTR)
      • AT1G66200.3 - [+] show detail - glutamine synthase clone F11
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT14251 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAACTAT 
    AAGTACTACC ACAACCACGA ACTCTAAAGC ATCATCTCAT TAACAAAAAT 
    AAAACACACA ATCTCAAGAT TTTCTACTTC TTATTACAAA GATACAATCT 
    TCTTGTTTCT TCTTGCAACC ATGAGTCTTC TTGCAGATCT TGTTAACCTT 
    GACATCTCAG ACAACAGTGA AAAGATCATC GCTGAATACA TATGGTTCGT 
    CTTCTTCCTC TGCTTTTGAC CATTTGAGTT TCTCTGGTTT

AT1G66200.1

Model type
Protein coding
Short Description
glutamine synthase clone F11
Curator Summary
encodes a cytosolic glutamate synthetase, this enzyme has low affinity with substrate ammonium
Computational Description
glutamine synthase clone F11 (GSR2); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to salt stress, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, apoplast, vacuole, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone R1 (TAIR:AT5G37600.1); Has 11094 Blast hits to 11090 proteins in 3405 species: Archae - 162; Bacteria - 5924; Metazoa - 440; Fungi - 257; Plants - 1757; Viruses - 3; Other Eukaryotes - 2551 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G66200.2

Model type
Protein coding
Short Description
glutamine synthase clone F11
Curator Summary
encodes a cytosolic glutamate synthetase, this enzyme has low affinity with substrate ammonium
Computational Description
glutamine synthase clone F11 (GSR2); FUNCTIONS IN: glutamate-ammonia ligase activity, copper ion binding; INVOLVED IN: nitrate assimilation, response to fructose stimulus, response to salt stress, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: cytosol, cytosolic ribosome, apoplast, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone R1 (TAIR:AT5G37600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G66200.3

Model type
Protein coding
Short Description
glutamine synthase clone F11
Curator Summary
encodes a cytosolic glutamate synthetase, this enzyme has low affinity with substrate ammonium
Computational Description
glutamine synthase clone F11 (GSR2); CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746); BEST Arabidopsis thaliana protein match is: glutamine synthase clone R1 (TAIR:AT5G37600.1).
Link
InterPro Scan - TAIR