1. Home
  2. Mutant Lines
  3. GT14255

GT14255

CSHL Arabidopsis genetrap mutant lines

Original: GT14255

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14255

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 851224 [Map]; Strand: w
      • AT3G03550.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14255 - 5-prime edge 
    TTTCTCCCTG TTTATAGCTG CGGCGCGAGG TAGAGGAGGA GTTGTGGCGA 
    CGGCGGTGGC AGTATTTGGA GATGAGAGTG TAGTAGCTGG CGAGGATGAA 
    GGCGCTAGCG AGGATTCCGA TGAGAGCGAT GAGGAGAGGA GAGAAATCAG 
    AGGAGGAAGA GTCGTCTTCG TCGTCGAGAT AGAAGGAAGG AGGAGGAGGG 
    AAGATGACGT AACACCATTG AGGGCAATAG ACACTGCATA CTCCTTGAGA 
    ACAGTCTCTG TATGAATCGT ATGTTGTACC CCATGGATTA GGGTTTCCTG 
    TTGAACCCAT TATTTGATTG TTGGAGAAAG ATAGAGAGAG AGAGCAAGGA 
    AGAAGATGGA GGTGTCAAGT GTCTCTCTCC TTTTTCTTTG GGCTCTGCTT 
    GTGTCTGGGA AGTGTCTATT TTTTTATTTC GAGTTAATTG GTATTATTAG 
    AGGGAGATAA TGAATAAATA TATGTG

AT3G03550.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G17600.1); Has 9886 Blast hits to 9859 proteins in 306 species: Archae - 0; Bacteria - 2; Metazoa - 2318; Fungi - 804; Plants - 5150; Viruses - 98; Other Eukaryotes - 1514 (source: NCBI BLink).
Link
InterPro Scan - TAIR