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GT14289

CSHL Arabidopsis genetrap mutant lines

Original: GT14289

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14289

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2925519 [Map]; Strand: w
      • AT3G09520.1 - [+] show detail - exocyst subunit exo70 family protein H4
        Distance: 0; Region: exon1 (CDS)
      • AT3G09530.1 - [+] show detail - exocyst subunit exo70 family protein H3
        Distance: -783; Region: promoter
    Flanking Genome Sequence: GT14289 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATCTTC 
    AGGGGTAAAT CGGACAACTG AGTTCAGGTT TCTCGCGCAC ATCGCCTTCT 
    CCCAAGATAA CAGAACCTCT CGTGTTGTAA AACTCGCGAT AGATCGGCAC 
    CAGCTTTCTC GATATCGATA CTTTGATCTC GTCTCGTATA TTTGGATCAG 
    CTACGACGCA GACACTGTGC TTACTATACG CGTTTTCGAA GCTCTCGCTG 
    AATTTTTCAA ACCGCTCCTT CATCNTCACT CGGCGACATC TCCACCGTAC 
    GATTCTCAGG TAAAGTAGCA ACCACCGGTC CCCAAGCTAG CCGCTTATAG 
    CTGCCGGCGA ATTGTCTCAT CTTAGCGAAA TGTCTCGTGA TCCAATCCTC 
    GCCGAGAAGG TTCTTCAGGT TTGAGGAACG AGCACGTGAG ACCACGTGCT 
    GGAGATTGTT GGTGAGGAAG AGATACTGTA TAGAGAAGTC TTTGTAGTGA 
    ATTGATTTAC GATCGATTTT ACAAAGGAGG ACGAGGATGA TCCAAGCGAA 
    ACGGATCGTC AGCTCCGACG AAGGAGAGTC GTCGGATTCT GAGACGTTGA 
    AGTAAGACTC CGGTAACAGC GACCTGTCCG GTGGTGGAGA TCCGGCGAGG 
    ATATCGACTA GTACGTTGCT GTAGTCAGCG AGGAGAGAGA GGTGATCCAT 
    GACGGAGATC GT

AT3G09520.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein H4
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein H4 (EXO70H4); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: stem, sperm cell, stamen, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H3 (TAIR:AT3G09530.1); Has 837 Blast hits to 827 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 71; Plants - 622; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09530.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein H3
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein H3 (EXO70H3); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H4 (TAIR:AT3G09520.1); Has 786 Blast hits to 774 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 29; Plants - 616; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR