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Mutant Lines
GT14296

GT14296

CSHL Arabidopsis genetrap mutant lines

Original: GT14296

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14296

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 351739 [Map]; Strand: c
- AT4G00830.3 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -277; Region: promoter
- AT4G00830.4 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -277; Region: promoter
- AT4G00830.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -284; Region: promoter
- AT4G00830.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -307; Region: promoter

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATCCACGA 
GCAAGGAACA TTACCCATGT GACATGATTC CTACATGATC AGTCTTGTCT 
TCTACGTTAT ACACTACTAC TCTATATCCA CCTAAATATA AATTAAATGC 
TTCTGAAATG GAATAATCTT AAACAGCACG TAGTTTTCAT ATCACCGAAG 
AAAACGGCAG GGCTGGCAAA ATCACGAATT TTTTAAACAG GTATAATAAA 
GAACTAGAAA ACACTAGGCC CAATAAAAAC AGTGGGCTTA AAAAGCGTTT 
TGATTTAGGG TTAATGTGTG CGTAACATGT GATCATAGCC CACGAGTGGG 
TAAGGAGTGT CTTCATCTTC TTCTACCGGA GATCGAGAAA TAGCCGACGA 
AGTTTTGTTT TTTGAGTAAA ACAGTATTCG TCGGACAACC GAAGCGAAAT 
CCCTAATTTC CCACAACACG AAATACCAAT TTCCCCAATT CGAAAACAAA 
CACGGTCTGG TATGCCGAGA AAATTCTCCA TTTCTACTTT TCTTATACAT 
TTGTTTTTGG TTGTTTCATA TAAAATACTT CTCATCTTCT TCGATTTTGT 
TACCCTCCCC CAAACC

5 prime edge [+] show sequence

Chromosome: 4; Position: 351659 [Map]; Strand: c
- AT4G00830.3 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -357; Region: promoter
- AT4G00830.4 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -357; Region: promoter
- AT4G00830.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -364; Region: promoter
- AT4G00830.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: -387; Region: promoter

ATCTCAAGTT GCAAAGTTGC AGCTTTTTTT TATGGTTTTC TTAACAACTT 
CACTTTGCAT GTAAAAACAA ATAAGGCCAG TGAAAATTTT CGTTATTTTA 
TACTAAAAAG ATTCCATATA ATTAACAAAG ATACCATGAC AGATTGATAA 
ACTATTGTTC ACATCCTAAT TGCAACATTT ATAGATAAAA ATATGAGCAT 
ACATATTTAT ATAGAGATTA GTTAGTAAAC ACTTCCAATT ATAAGCTACA 
AATTCACACA CACAAACATA AACACAAACA AAATTACACA CCAATCTCAA 
AGATCATCAA TAAAAACTGA AAAAGTTATG GTTCTTTTTG TCAAATTGTT 
TTTATTTATA TATAACAAAA AAAAAGGGGG GAAAAAAATC CTGACCGGGT 
GATTTGGGTG GATTATGGAA TCCTCTTAAC CCTCCCCCAA AAACCCCAGG 
AAAAGCAGGG GAAATCCCCC CCCCCCCCCC AAAAAACTCC GTACAACAAG 
AAAAGGAATT TGATTGGTGG

AT4G00830.1

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2); Has 49171 Blast hits to 28860 proteins in 1092 species: Archae - 87; Bacteria - 2901; Metazoa - 24152; Fungi - 5892; Plants - 6872; Viruses - 415; Other Eukaryotes - 8852 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00830.2

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00830.3

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2).
Link: InterPro Scan - TAIR

AT4G00830.4

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2).
Link: InterPro Scan - TAIR