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GT14337

CSHL Arabidopsis genetrap mutant lines

Original: GT14337

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14337

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13102808 [Map]; Strand: c
      • AT3G32110.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT14337 - 3-prime edge 
    AATGAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TAATTGGCTG TGATAGTAGA TAGTGTCACA GGTGCACATG ATCGTTTAGC 
    TTGGGGAATG ACTTCAAATG GGCGTTTCAC AGTCAAATCA GCAGTTGCAT 
    TGTTGACTAA TGATGATTCT CCGAGGCAGG ATATGAGTAG TTTATATGGG 
    CGTGTGTGGA AAGTCCAGGC ACCGGAACGG GTACGGGTTT TTCTTTGGTT 
    GATAGTGAAC CAAGCAATTA TGACGAACTC CGAGCGTAAG AGAAGGCATT 
    TGTGTAATTC TGATGTTTGT CAAGTTTGTC GAGGAGGCAT AGAATCAATC 
    ATACATGTTC TTAGGGATTG TCCCGCTATG TCGGGCATAT GGGATCGTAT 
    TGTACCAAGG AGATTGCAGC AGTCGTTCTT CACTATGTCC TTATTGGAGT 
    GGCTCTACTC GAATCTAAGG CAAGGTATTA TGGCAGAGGG TAGTGACTGG 
    TCGACGATGT TTGCTATGGC GGTTTGGTGG GGTTGGAAAT GGCGGTGTAG 
    CAATATTTTT GGGGAGAATA AAACATGCCG TGATCGGGTG CGCTTCATAA 
    AAGACCTAGC TGCGGAGGTG TCGCTAGCTT ACTCGCGGGT ACCGAACCGG 
    ATCGAATCGG TATTTATGTA TAT

AT3G32110.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.9e-52 P-value blast match to GB:AAA39398 ORF2 (Mus musculus) (LINE-element)
Link
InterPro Scan - TAIR